Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0473 |
Symbol | |
ID | 3682439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 597150 |
End bp | 597932 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637715800 |
Product | ABC transporter-like |
Protein accession | YP_320992 |
Protein GI | 75906696 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.492847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.175391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGAAC TCGATATTTC TGGATTTAAA TCGCCGATGA ACGCAGATGA AAGCCGATAT AAAAATGGAC ACGATTTTAA AATTTTAGAA ATTCAGGAAC TTGATGTTAA CTATGGCGGT ATTCAAGCTC TGAAAAAGAT TAATTTAACT ATTCAAAAAG GTGAGGTTGT TACATTAATT GGTGCGAATG GTGCAGGTAA AAGTACAACA TTAAGGGCGA TATCGAAGAT AGTTACTCCT AAAAATGGGC AAATTATTTA TAGTGGACGT AATATTACAC GCCGTCTACC CCATGAAGTT GTGAAGTTTG GTATTGCCCA TTGTCCAGAA GGGCGGAGGG TATTGGCAAA GCAAACTGTT TTAGATAATT TACTCTTGGG TGCATATATT CGCTTCAATC AAACAGAGAT TAAAGCCGAT ATTAAACAAC AATTTGAATT GTTCCCCAGG CTAGCACAAC GACAAAATCA ACTAGCGGGA ACTCTCAGTG GAGGAGAACA GCAAATGTTG GCGATCGCTC GTGCTTTAAT GAGTAGACCA CAACTTTTAC TTTTAGATGA GCCTAGCTTG GGTTTAGCAC CTGCGATAGT TAAGGAAATA TTCTCGATTA TTGAAAATCT GCGTGCCACT GGTGTGACTA TTTTACTTGT GGAACAGAAC GCCAATTTAG CTCTACAAAT CGCTGATAGA GGATATGTTT TAGAAGCTGG CTCTATTACC TTATCAGGTG CGGCATCCAA CTTAATTAAT GATGAGCGCG TGAAAAAAGC CTACTTGGGT TAA
|
Protein sequence | MSELDISGFK SPMNADESRY KNGHDFKILE IQELDVNYGG IQALKKINLT IQKGEVVTLI GANGAGKSTT LRAISKIVTP KNGQIIYSGR NITRRLPHEV VKFGIAHCPE GRRVLAKQTV LDNLLLGAYI RFNQTEIKAD IKQQFELFPR LAQRQNQLAG TLSGGEQQML AIARALMSRP QLLLLDEPSL GLAPAIVKEI FSIIENLRAT GVTILLVEQN ANLALQIADR GYVLEAGSIT LSGAASNLIN DERVKKAYLG
|
| |