Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0447 |
Symbol | |
ID | 3682452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 573578 |
End bp | 575257 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637715776 |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_320968 |
Protein GI | 75906672 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.130684 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGAG TTGAATTTCC ACCACACATT CCGCCAGATG ACAATCAGCC GAAAAATTTG GCGGTTGGAC ATGGCGTAAC TCTGCCAGCT TGGAAATGGC GAGATTACTT CACTTTTAAT GTAGACCATA AGGTTATTGG TATCCAATAC CTGGTAACAG CATTTTTGTT CTATCTCATC GGTGGGTTGA TGGCGATCGC TATCCGTACC GAGTTAGCAA CACCTGATGC AGACTTCATT GATCCGAATC TGTATAACGC CTTCATGACC AATCACGGAA CAATCATGAT TTTCTTATGG ATTGTTCCTA GTGCCATTGG GGGGTTTGGT AATTATCTCA TTCCCTTGAT GATTGGGGCG CGGGATATGG CGTTTCCCAA ACTGAATGCG ATCGCTTTTT GGTTAAACCC ACCAGCCGGT TTACTCTTGT TACTTAGCTT TATTTTTGGT GGTTCTCAGT CTGGTTGGAC TGCTTACCCA CCATTGAGTT TAGTAACAGC GCCAATAGCA CAAACCCTGT GGATTTTGGC AATTGTTCTG GTAGGGACTT CTTCCATTCT GGGTTCTGTG AACTTCGTTG TCACCATCTT GATGATGAAG GTTCCGAGCA TGAAATGGGA TCAACTACCT TTGTTCTGCT GGGCAATTTT GGCAACATCC GTACTAGCAC TACTCTCTAC ACCAGTGTTA GCTGCGGGTT TAGTTCTGCT ATTATTTGAC CTTAACTTTG GTACTTCCTT CTTCAAACCA GATGCTGGCG GTAACGTTGT TATTTACCAA CATTTGTTTT GGTTCTACTC CCACCCAGCA GTATATTTGA TGATTCTGCC CATCTTCGGC ATTATGTCGG AGGTGATTCC CGTTCATGCA CGGAAACCAA TTTTTGGTTA TAAGGCGATC GCCTATTCTA GTGTCGCCAT CTGTGTAGTC GGTTTGTTCG TCTGGGTTCA CCATATGTTT ACCAGTGGTA CACCCGGTTG GATGCGGATG TTTTTCACCA TTTCTACTTT GATTGTTGCT GTTCCCACTG GTGTGAAAAT TTTCGGTTGG GTGGCAACTT TATGGGGTGG AAAGATCCGC TTCACCAGCG CCATGCTGTT TGCTATTGGC TTGTTGTCCA TGTTTGTCAT GGGCGGTTTA AGCGGCGTGA CAATGGGTAC AGCACCTTTT GATGTTCACG TCCACGACAC CTATTATGTG GTGGCACACT TCCACTACGT TCTGTTTGGT GGTTCTGTAT TTGGGATTTA TGCCGGGATT TATCACTGGT TCCCCAAAAT GACAGGGCGG AAGTTGGGTG AAGGCTGGGG TCGGATTCAC TTTGCCCTGA CTTTGGTTGG AACTAACTTG ACTTTCTTAC CTATGCACAA GTTGGGTTTA CAAGGTATGC CCCGGCGGGT AGCAATGTAT GACCCCCAGT TTGTGGATTT GAATGTACTT TGTACTATCG GTGCATTCAT TTTAGGCTTA TCGGTGATTC CTTTTACAAT CAATGTTCTC TGGAGTTGGA GCAAGGGCGA ATTAGCTGGG GATAATCCTT GGGAAGCTTT GAGCCTGGAA TGGACTACTG CTTCTCCTCC TTTGGTGGAA AATTGGGAAG TTCTCCCTGT GGTGACTCAT GGGCCTTATG ACTATGGTCA TAGTTTAGAA GCCGCACCAG AAGTAAGTGT ACAGACCTAA
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Protein sequence | MTRVEFPPHI PPDDNQPKNL AVGHGVTLPA WKWRDYFTFN VDHKVIGIQY LVTAFLFYLI GGLMAIAIRT ELATPDADFI DPNLYNAFMT NHGTIMIFLW IVPSAIGGFG NYLIPLMIGA RDMAFPKLNA IAFWLNPPAG LLLLLSFIFG GSQSGWTAYP PLSLVTAPIA QTLWILAIVL VGTSSILGSV NFVVTILMMK VPSMKWDQLP LFCWAILATS VLALLSTPVL AAGLVLLLFD LNFGTSFFKP DAGGNVVIYQ HLFWFYSHPA VYLMILPIFG IMSEVIPVHA RKPIFGYKAI AYSSVAICVV GLFVWVHHMF TSGTPGWMRM FFTISTLIVA VPTGVKIFGW VATLWGGKIR FTSAMLFAIG LLSMFVMGGL SGVTMGTAPF DVHVHDTYYV VAHFHYVLFG GSVFGIYAGI YHWFPKMTGR KLGEGWGRIH FALTLVGTNL TFLPMHKLGL QGMPRRVAMY DPQFVDLNVL CTIGAFILGL SVIPFTINVL WSWSKGELAG DNPWEALSLE WTTASPPLVE NWEVLPVVTH GPYDYGHSLE AAPEVSVQT
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