Gene Ava_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0439 
Symbol 
ID3682600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp559514 
End bp560701 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content44% 
IMG OID637715768 
Productglycosyl transferase, group 1 
Protein accessionYP_320960 
Protein GI75906664 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.63616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.246841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAT TGGTACTAAG TTGGGAATTT CCACCGAGAA TAGTTGGCGG TATTGCTCGT 
CATGTGGCGG AACTATATCC TGAACTGGTA AAGCTAGGGC ATGAAATCCA TCTAATTACG
GTAGAAGTTG GTCAAGCATC GATGTACGAA GTCGTGGAGG GAATACACGT ACATCGAGTA
CCAGTTTCTC ATAGTAATGA CTTTTTTCAC TGGGTAGTTA ATCTGAACCA AAGCATGGGA
CATCACGGTG GGAAGTTAAT TACGGAGGAA GGGCCGTTTG ATTTAATCCA TGCCCATGAT
TGGCTAGTGG GAGATGCAGC GATCGCTCTT AAGCATAACT TTAAAATTCC CCTGATTGCT
ACTATCCACG CCACAGAATA CGGACGCTAC AACGGGATTC ACAACGACAC CCAACGCTAC
ATTCACGACA AAGAAAACCT ACTCGCCTAC AACGCCTGGC GAATTATCGT CTGTACCAAC
TATATGCGCC AAGAAGTAGG GCGCACCCTA GAAAGTCCCT GGGATAAAAT CGATGTGATT
TATAACGGTA TTCGACCAGA AAAGAAACAG CACCACGAAG ATTTTCATGC TCAAGATTTT
CGTCGTCAAT TTGCCGAAGA CCATGAGAAG ATTGTCTACT ATGTTGGTCG CATGACTTAT
GAAAAAGGTG TATCAAATTT AATCAATGCA GCCCCCAAAG TCCTATCAGA AATGGGCGGC
TACGTAAAAT TTGTGATTGT TGGTGGTGGT AATACTGACA ATCTTAAACG TCAGGCTTGG
GATTTAGGAA TTTGGCACAA ATGTTACTTT ACCGGTTTTC TTTCCGATGA GTATTTGGAC
AAATTCCAAA CTGTGGCTGA TTGTGCAGTA TTTCCTAGTC TTTACGAACC CTTTGGGATT
GTAGCTTTAG AAAGCTTCGC CTCGCGGGTT CCCGTAGTGG TGTCCGATAC AGGCGGCTTC
CCTGAAGTAG TGCAGCATAC CCGAACAGGT ATCGTAACTT GGGTGAATAA CCACGATTCT
TTGGCTTGGG GAATTCTAGA AGTTTTGAAA AATCCGGGTT ATAGTCAATG GCTGATTGAT
AACGCCTATA AGGATTTGGA ACACCGCTTT AGCTGGCCGA AATTAGCCCA ACAAACCCAA
GCTGTTTATC AACGAGTGGT GAAAGAGCGA TCGCAAGTTG AATGGTAA
 
Protein sequence
MKILVLSWEF PPRIVGGIAR HVAELYPELV KLGHEIHLIT VEVGQASMYE VVEGIHVHRV 
PVSHSNDFFH WVVNLNQSMG HHGGKLITEE GPFDLIHAHD WLVGDAAIAL KHNFKIPLIA
TIHATEYGRY NGIHNDTQRY IHDKENLLAY NAWRIIVCTN YMRQEVGRTL ESPWDKIDVI
YNGIRPEKKQ HHEDFHAQDF RRQFAEDHEK IVYYVGRMTY EKGVSNLINA APKVLSEMGG
YVKFVIVGGG NTDNLKRQAW DLGIWHKCYF TGFLSDEYLD KFQTVADCAV FPSLYEPFGI
VALESFASRV PVVVSDTGGF PEVVQHTRTG IVTWVNNHDS LAWGILEVLK NPGYSQWLID
NAYKDLEHRF SWPKLAQQTQ AVYQRVVKER SQVEW