| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0433 |
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| Symbol | ispG |
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| ID | 3682594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 551923 |
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| End bp | 553149 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637715762 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_320954 |
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| Protein GI | 75906658 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000301466 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.208688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTC TGCCGACACC CACAACATCC AGTAATACAG CCAACCAAAG CACATTTGAT
ACGACAATCA AGCGTCGTAA AACCCGTCCG GTAAAAGTGG GTAATGTCAC CATCGGCGGT
GGCTACCCTG TGGTGGTGCA GTCGATGATT AACGAAGACA CTCTTGATAT CGACGGTTCC
GTAGCCGCTA TTCGGCGCTT GCACGAAATT GGCTGTGAAA TCGTCCGTGT CACAGTGCCA
AGCATAGCTC ACGCCGTAGC GTTGGCAGAA ATTAAACAAA AACTCATTAC AACTTACCAA
GATGTGCCAA TTGTTGCTGA CGTACACCAC AATGGGATGA AAATTGCCCT GGAAGTTGCC
AAACATATTG AAAAAGTACG GATAAACCCC GGCTTGTATG TGTTTGAGAA ACCCAACACC
AATAGAACTG AATATACTCA AGCCGAATTT GAAGAAATTG GCGAAAAAAT CCGCGAAACT
CTCGCACCCT TGGTAATTAC TCTGCGCGAC CAAGGTAAAG CCATGCGTAT TGGTGTCAAT
CATGGTTCTC TCGCTGAGAG AATGTTATTT ACCTACGGCG ATACTCCAGA AGGCATGGTG
GAATCAGCTT TAGAATTTAT TCGCATCTGT GAATCTCTAG ACTTCCGCAA CATAGTCATT
TCCATGAAAG CCTCACGAGT TCCCGTGATG GTAGCCGCCT ATCGCCTCAT GGCTAAACGC
ATGGATGATT TAGGCATGGA TTATCCCTTA CATTTAGGTG TCACCGAAGC TGGTGATGGT
GAATATGGAC GGATTAAATC CACAGCAGGT ATTGCCACAT TATTAGCTGA TGGTATTGGT
GATACTATTC GCGTCTCCCT AACAGAAGCA CCGGAAAAGG AAATTCCAGT CTGTTACAGC
ATTCTGCAAG CTTTAGGTTT GCGGAAAACA ATGGTGGAAT ATGTAGCTTG TCCTTCCTGC
GGTCGTACTT TATTTAACTT AGAAGAAGTA CTACATAAAG TACGTGAATC TACTAAACAC
CTCACAGGAC TAGACATTGC TGTTATGGGT TGCATTGTCA ATGGCCCAGG CGAGATGGCT
GATGCTGACT ACGGTTATGT AGGTAAAACT CCTGGTTACA TTTCTTTATA TCGTGGCAGA
GAAGAAATTA AAAAAGTTCC AGAAGATAAA GGCGTTGAGG AATTAATTAA CCTCATTAAA
GCTGATGGTC GCTGGGTAGA TCCTTAG
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| Protein sequence | MQTLPTPTTS SNTANQSTFD TTIKRRKTRP VKVGNVTIGG GYPVVVQSMI NEDTLDIDGS
VAAIRRLHEI GCEIVRVTVP SIAHAVALAE IKQKLITTYQ DVPIVADVHH NGMKIALEVA
KHIEKVRINP GLYVFEKPNT NRTEYTQAEF EEIGEKIRET LAPLVITLRD QGKAMRIGVN
HGSLAERMLF TYGDTPEGMV ESALEFIRIC ESLDFRNIVI SMKASRVPVM VAAYRLMAKR
MDDLGMDYPL HLGVTEAGDG EYGRIKSTAG IATLLADGIG DTIRVSLTEA PEKEIPVCYS
ILQALGLRKT MVEYVACPSC GRTLFNLEEV LHKVRESTKH LTGLDIAVMG CIVNGPGEMA
DADYGYVGKT PGYISLYRGR EEIKKVPEDK GVEELINLIK ADGRWVDP
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