Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0432 |
Symbol | |
ID | 3682593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 550435 |
End bp | 551721 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637715761 |
Product | C-terminal processing peptidase-2 |
Protein accession | YP_320953 |
Protein GI | 75906657 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0116039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.127001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGATTA CAAAAAGTAG GCTTGTTTTG GGTGCTACGG CAGTGACACT CTCCACGATC GCAGTTACTA GCCTTGGCAT CCACTCGCGC GGTCAGGCTT TATTTAAAGC AAGTCCCAAG GAACTGGTAG ATGAAGTATG GCAAATCGTT CAGCGTCAAT ACGTAGACGG CACTTTTAAC CAAGTGGATT GGCAGGCTGT TCGTAAGGAA TACTTAAACA AGTCCTACAG TAACCAGCAG GAAGCTTATA AGTCCATACG GGAAATGCTC AAACGCCTGA ATGATCCATA CACTCGGTTT ATGGACCCTC AGGAGTTCAA GAATATGCAG GTGGATACCT CCGGAGAACT TACAGGGATT GGTATCACCA TCAGTCAGGA TGAAAAAACT AAGCAATTGG TAGTGATTGC ACCAATTGAA GACACCCCAG CTTTTAAAGC TGGCATTTTA GCTAAAGATG TCATCCTCAA AATTGATGGT AAAAGCACCA AGGGGATGGA TACTAATCAA GCTGTAAATT TGATCCGAGG TACAGCTGGC TCACAAGTAA CCTTGACGAT TCAGCGCAGC AATCAAGAAA AACAATTCAA AATCACAAGG GCGCGGATTG AAATTCATCC GGTGCGCTAT TCTCAAAAGC CAACCTCTGT TGGTAAAGTA GGCTACATTC GTCTCAACCA GTTCAGCGCC AATGCTGGTA AAGAGATGCA GGAAGCCATC AAAAATTTAG AAAAACAACA AGTAGCTGGT TATATTCTGG ATTTACGTGG TAATCCTGGT GGTTTACTCT TTTCCAGTGT AGAAATTGCG CGGATGTGGA TGGATAAAGG CACAATTGTC TCTACTGTTG ACCGCCAAGG AGAACGAGAA AGAGAAGTGG CGAACGGACG CGCTTTGACA AACAAACCTT TAGTAATTTT GGTGGATAAA GGTTCAGCCA GTGCTAGTGA AATTCTCTCC GGCGCATTGC AAGATAATAA GCGTGCTGTT ATTGTAGGTA CTCAAACTTT TGGTAAGGGC TTAGTACAAT CAGTCCGTCC TCTAGATGAT GGCTCAGGAT TGGCAGTAAC AATCGCCAAA TACCTAACTC CCAATGATAG GGATATTAAC AAGCATGGTA TTGATCCCGA TGTGAAAGTA GAATTAACGG ATGCCCAACG CCAAGATTTG TGGCTACGTG AGCGCGAAAA ACTCGGCACA TTGGACGATT TGCAATTTGC TAAAGCAGTG GAAATCTTAG GTAAACAGAT TGCTGCCAAA GGTACGCCAA CAGCAGAAAA GAAGTAA
|
Protein sequence | MVITKSRLVL GATAVTLSTI AVTSLGIHSR GQALFKASPK ELVDEVWQIV QRQYVDGTFN QVDWQAVRKE YLNKSYSNQQ EAYKSIREML KRLNDPYTRF MDPQEFKNMQ VDTSGELTGI GITISQDEKT KQLVVIAPIE DTPAFKAGIL AKDVILKIDG KSTKGMDTNQ AVNLIRGTAG SQVTLTIQRS NQEKQFKITR ARIEIHPVRY SQKPTSVGKV GYIRLNQFSA NAGKEMQEAI KNLEKQQVAG YILDLRGNPG GLLFSSVEIA RMWMDKGTIV STVDRQGERE REVANGRALT NKPLVILVDK GSASASEILS GALQDNKRAV IVGTQTFGKG LVQSVRPLDD GSGLAVTIAK YLTPNDRDIN KHGIDPDVKV ELTDAQRQDL WLREREKLGT LDDLQFAKAV EILGKQIAAK GTPTAEKK
|
| |