Gene Ava_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0429 
Symbol 
ID3682590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp547804 
End bp548916 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content44% 
IMG OID637715758 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_320950 
Protein GI75906654 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0122439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0635336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATA AAAAACGAGT TTGCATTATC TTAGGGACAC GCCCCGAAGC AATTAAACTA 
GCTCCGGTAA TTCAGGTCTT CCAAAAATCT CCAGACTTTG AGCTGCAAGT GATTTTAACT
GGACAGCATC GTGAGATGGT TGAGCAAGTG ATGCAGTTAT TCCATCTCAA GGCGGATTAT
GACCTAGAGA TTATGCAGCC TCAACAGTCT CTAAGTGATA TTACCTGCCG CAGCTTACGC
GGTTTGGAAG GATTATTTAT TCAAAATAAG CCAGATTTAG TCCTGGTGCA AGGAGATACG
ACAACAGCTT TTGCGGCAAG TTTAGCAGCT TTTTACCAAA AAATTCCTGT AGGTCATGTG
GAAGCTGGGT TAAGAACAGA TGAATTATTT AATCCTTACC CAGAAGAAGC TAATCGGCGG
TTGATTTCCC AAATTACCCA GTTGCACTTT GCACCAACGA CTTTGGCTGT GGAAAACTTG
CAGCGTTCTG GTGTTTTGGG GAAAATTCAC TTAACTGGTA ATACTGTAAT CGATGCTTTA
TTATATGTAG CCGCCAATGC ACCAGCTTGC GATGTACCTG GTTTAAACTG GGATGAATAT
CGTGTGCTAT TGGCTACAGT TCATCGGCGG GAAAATTGGG GTGAGCCACT ACAGGCGATC
GCTCAAGGAT TTTTGCAGAT ATTAGATAAG TTTCCTGATA CCGCCTTGCT TTTACCCCTA
CACCGCAATC CTACAGTCCG TGAACCATTG CAAGCATTAC TAGGGAGTCA TCCAAGGGTA
TTTTTAACAG AACCCCTCGA TTATGCCGAA CTGGTGGGAG CAATCGGGCG ATCGCACTTT
TTATTGACTG ATTCTGGTGG TTTGCAAGAA GAAGCGCCTA GTCTGGGTAA ACCAGTTCTG
GTTCTCAGGG AAACGACAGA AAGACCGGAA GCAGTCACGG CGGGTACAGC TAAACTTGTT
GGTACTGACA GTAAAACTAT TTCCTCTGCT GCCAGTGAGT TATTGAGTAA TCCAGTAGCT
TATGATGCGA TGGCTAATGC CATTAATCCC TTCGGTGATG GTCATGCAGC CGAACGCATT
TTAGAAATTG TGCAGAATTA TTTCGCTAGC TGA
 
Protein sequence
MTNKKRVCII LGTRPEAIKL APVIQVFQKS PDFELQVILT GQHREMVEQV MQLFHLKADY 
DLEIMQPQQS LSDITCRSLR GLEGLFIQNK PDLVLVQGDT TTAFAASLAA FYQKIPVGHV
EAGLRTDELF NPYPEEANRR LISQITQLHF APTTLAVENL QRSGVLGKIH LTGNTVIDAL
LYVAANAPAC DVPGLNWDEY RVLLATVHRR ENWGEPLQAI AQGFLQILDK FPDTALLLPL
HRNPTVREPL QALLGSHPRV FLTEPLDYAE LVGAIGRSHF LLTDSGGLQE EAPSLGKPVL
VLRETTERPE AVTAGTAKLV GTDSKTISSA ASELLSNPVA YDAMANAINP FGDGHAAERI
LEIVQNYFAS