| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0427 |
|---|
| Symbol | |
|---|
| ID | 3682588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 545922 |
|---|
| End bp | 547184 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637715756 |
|---|
| Product | cysteine desulphurases, SufS |
|---|
| Protein accession | YP_320948 |
|---|
| Protein GI | 75906652 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.21345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0671623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTATA CACCTACCAA AACCCTTGCA GATAAAGTCC GCGCCGACTT CCCTATATTA
CGTGAGGAAG TCAATGGTAA AACCTTAGTT TACCTAGATA ACGCGGCGAC ATCGCAAAAA
CCCTTGTTCG TCTTAAATGC ACTCAGGGAT TATTACGAGC AATATAACTC CAATGTGCAT
CGCGGAGCGC ATACCCTCAG CGCCAAAGCC ACCGACGCTT ATGAAGGCGC ACGGGACAAA
ATCGCTAAAT TTATTAATGC AGCCTCCCGC CAAGAAATTG TTTACACCCG CAACGCCAGC
GAAGCGATTA ACCTCGTCGC CTATAGCTGG GGGATGAACA ATTTACAAGC AGGCGACGAA
ATTATTCTGT CGGTGATGGA ACACCACAGT AATATAGTTC CCTGGCAATT TGTGGCTCAA
AAAACGGGTG CAGTTCTTAA GTTTGTGGAA TTGACACCAG AACAAACCTT GGATATGGAA
CAGTTTAAAC AACTGATTTC GGAAAAAACA AAACTGGTTT CCATTGTCCA CGTTTCTAAT
ACATTGGGTT GTATAAATCC AGTGGCAGAG ATTGCGGAAA TTACTCACAG ATACGGCGCG
AAATTCTTAG TTGATGCTTG TCAAAGTGTT CCCCATATGC CTATCGATGT CCAGCAAATA
GACTGTGACT GGCTGGTAGC ATCTGGGCAT AAAATGTGCG CTCCCACAGG CATCGGATTC
TTATACGGTA AGTTGGCATT ATTAGAAGCC ATGCCCCCAT TTTTTGGTGG TGGGGAAATG
ATAGCCGAGG TATATCTAGA CCATTCTACC TATGCCGAAT TACCCCATAA ATTTGAGGCT
GGTACACCTG CAATTGGTGA GGCGATCGCT CTTGGTGCAG CGATAGATTA TCTTACTGAT
ATCGGCATGG ATAAAATCCA CGCCTACGAA GCTGAATTAA CGGCTTATTT GTGGCAAAAA
TTAGAGCAAA TTCCTCAAAT TACCCTCTAT GGCCCCACAC CGGATGCTCA TGGAGGAGGT
AGAGCCGCAT TAGCCACATT TACAATTGAA GGTATCCACG CTAACGACCT ATCTACACTA
TTAGATCAAG AAGGTGTAGC CATTCGTTCT GGACACCACT GCACCCAACC ATTACACCGC
CACTTAGGTT TAGCTGGAAC CGCAAGAGCT AGTTTATCTT TCTACAATAC CCGTGAGGAA
ATTGATGTAT TCATCAAAGC ACTCAAGGAA ACCATTGACT TTTTTGCTGG GATCTTTGGA
TGA
|
|---|
| Protein sequence | MTYTPTKTLA DKVRADFPIL REEVNGKTLV YLDNAATSQK PLFVLNALRD YYEQYNSNVH
RGAHTLSAKA TDAYEGARDK IAKFINAASR QEIVYTRNAS EAINLVAYSW GMNNLQAGDE
IILSVMEHHS NIVPWQFVAQ KTGAVLKFVE LTPEQTLDME QFKQLISEKT KLVSIVHVSN
TLGCINPVAE IAEITHRYGA KFLVDACQSV PHMPIDVQQI DCDWLVASGH KMCAPTGIGF
LYGKLALLEA MPPFFGGGEM IAEVYLDHST YAELPHKFEA GTPAIGEAIA LGAAIDYLTD
IGMDKIHAYE AELTAYLWQK LEQIPQITLY GPTPDAHGGG RAALATFTIE GIHANDLSTL
LDQEGVAIRS GHHCTQPLHR HLGLAGTARA SLSFYNTREE IDVFIKALKE TIDFFAGIFG
|
|---|
| |