Gene Ava_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0425 
Symbol 
ID3682586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp543735 
End bp544523 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content46% 
IMG OID637715754 
ProductFeS assembly ATPase SufC 
Protein accessionYP_320946 
Protein GI75906650 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0552296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTG AAAATAGTGA AGTTGTGCTG TCGGTGAAGA ATTTGACGGC GGAGGTTGAT 
GGTACGCCCA TTCTCAAGGG TGTGAATCTT GAGGTGCGTT CTGGTGAAAT CCATGCGATT
ATGGGGCCGA ATGGTTCTGG TAAGAGTACT TTTTCTAAGG TGTTGGCGGG ACATCCTGCT
TATACGGTGA CTGGTGGTGA GGTAATTTTT CAAGGACAGA ATTTATTGGA GTTGGAACCG
GAGGAGCGGG CGCGGACTGG TGTGTTTCTG GCGTTCCAGT ATCCTTTGGA AATTCCTGGT
GTGAGTAATT TGGATTTCTT GCGGGTGGCT TATAATTCTC GTCGCAAAGC CCAAGGGTTG
GAGGAAATTG ATACCTTTGA TTTTGACGAC TTGATTGAGG AAAAGTTGGA AGTGGTGAAG
ATGAATCCTG CTTTCCTGAA TCGGAGTGTG AATGAAGGGT TTTCTGGTGG TGAGAAGAAG
CGCAATGAGA TTCTGCAAAT GGCGCTGCTG GAACCGAAGT TGGCAATTTT GGATGAGACT
GATTCTGGTT TAGATATTGA TGCACTGAAA ATTGTGGCTC ATGGTGTGAA TCAACTCGCT
AGTCCAGAAA ATGCCACGAT TATGATTACT CACTACCAAC GGTTACTCGA TTATATTGTG
CCGGATTTTG TCCATGTGAT GGCACGGGGG CAGATAATTA CTAGTGGTGG TAAGGAATTG
GCACTAGAGT TAGAGTCGCG TGGTTATGAC TGGCTACTAG AAGATGCTGC TGTTGAGGTG
GGTGTGTAA
 
Protein sequence
MIIENSEVVL SVKNLTAEVD GTPILKGVNL EVRSGEIHAI MGPNGSGKST FSKVLAGHPA 
YTVTGGEVIF QGQNLLELEP EERARTGVFL AFQYPLEIPG VSNLDFLRVA YNSRRKAQGL
EEIDTFDFDD LIEEKLEVVK MNPAFLNRSV NEGFSGGEKK RNEILQMALL EPKLAILDET
DSGLDIDALK IVAHGVNQLA SPENATIMIT HYQRLLDYIV PDFVHVMARG QIITSGGKEL
ALELESRGYD WLLEDAAVEV GV