Gene Ava_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0421 
Symbol 
ID3682640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp540108 
End bp540743 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content47% 
IMG OID637715750 
Producthypothetical protein 
Protein accessionYP_320942 
Protein GI75906646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.504733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.105632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATACG TCAATAGAGT AGGCGACGAT GTTATTCAAC CTGAACCTAC GGTGGTGGGA 
AGAGTAGGTG ATTACCATGA CCGTGTGCGT TGGGGTCCCA TAATTTCTGG TGTATTAGTT
GCTTTAGCTA CTCAACTAAT TTTGAGTGCT TTATTTGGTG CCATTGGTGC TGGTACAGTT
TCTGGTTCAG GCGCACCTAG AACTATTGCG CCTAACGTGG CGGGGAATGT AGGGCTTTGG
TCTACGGTTG CTTTACTGCT TTCTCTGTTC GTTGGTGGTT GGGTAACAGC TCGCGCTTGT
GGTCCAATGA ACCGAAATAC AGCACTACTT AACGGCGCAA TCCTTTGGGC GACCACTTTA
GCACTTAGCT CATGGTTATT AGCCAGTGGA GTATCGGGTG CTTTTGGTGT TGCAGCTTCT
AACGCAGGAG AAGTTATCAA CCAGGTACAA CAACCAGGTG CTGCAATACC ACAAAATGTA
CCCAACGTTA CGGCAGAACA AGCTCGTGAT ATTGCGGCCG CAACTTCTAG AGGTTTGTGG
TGGTTTGTAT TCGGTTCTTT ATTAGGTTTA GTTGCTTCCA TGATAGGTGC AGCAGCAGGA
GTTCGTAATC CTCGCTCTAA CAATTACAAC GCTTAA
 
Protein sequence
MSYVNRVGDD VIQPEPTVVG RVGDYHDRVR WGPIISGVLV ALATQLILSA LFGAIGAGTV 
SGSGAPRTIA PNVAGNVGLW STVALLLSLF VGGWVTARAC GPMNRNTALL NGAILWATTL
ALSSWLLASG VSGAFGVAAS NAGEVINQVQ QPGAAIPQNV PNVTAEQARD IAAATSRGLW
WFVFGSLLGL VASMIGAAAG VRNPRSNNYN A