Gene Ava_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0420 
Symbol 
ID3682639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp539422 
End bp539748 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content42% 
IMG OID637715749 
Producthypothetical protein 
Protein accessionYP_320941 
Protein GI75906645 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.932362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0258218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTCA CAACAACAGA TGTAATTCAA GGTGCAGTAA TTGATTCTTA CTTAGGTATT 
GTTACCGCAG AAGTTGTTTA TGGTAGCAAT TTTCTCCGAG ATTTTCTAGC TGGTATCCGT
GATGTTATCG GTGGACGGAC TGGCAGCTAT GAACGTTTAT TTGAGCAGGG ACAACGTAAA
GCCATAGAAG AATTAGAACT CCGGGCGCAA CGTTTAGGAG CCAATGCTGT CATCGGTATT
GAAATAGACA CCGGAACAAT TAATGTAGAC CAGTCAGGTG TTTTATTATT GATCACTGCA
ACAGGTACAG CAGTGAGAGT ACGTTAG
 
Protein sequence
MIVTTTDVIQ GAVIDSYLGI VTAEVVYGSN FLRDFLAGIR DVIGGRTGSY ERLFEQGQRK 
AIEELELRAQ RLGANAVIGI EIDTGTINVD QSGVLLLITA TGTAVRVR