Gene Ava_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0418 
Symbol 
ID3682637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp537575 
End bp538477 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content41% 
IMG OID637715747 
ProductABC transporter-like 
Protein accessionYP_320939 
Protein GI75906643 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.307879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0288734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCTG CTGTTCTTCT AGAAAACGTC TACAAATTTT ATAACAACAC TCCTGTAGTT 
AATGACCTGT CATTCAACAT TGAGGCTGGA GAAATATTTG CCCTCCTCGG CCCGAACGGT
GCAGGGAAGT CAACCACAAT TCGGATGCTG ACTACACTAA CAAAACCATC CCAAGGAAAG
ATGGAGGTAG CTGGATATGA TGTAGTACGC CAACCTTTGC TAGCTAAGCA AAGTATTGGC
GTTGTCTTGC AGCAAACTAG TGTAGATGGT GATTTAAGTG TGTGGGAAAA TATGGAACTA
CATGGGAGAC TACATCACAT CCCTAACCCA CAGCGACAAC GACTAATTAA TCAATGGCTG
GATTATGTTG AATTAGCAGA CAGACGGGAA AGCTTGGTAA AAACTCTGTC TGGAGGGATG
AAACGAAGAT TGCAAATAGC GAGAGCTTTA TTGCATCAAC CACAAATATT GTTTTTGGAT
GAACCGACGG TAGGGCTAGA CCCCCAAACT CGTCGTCGGT TGTGGGAAAT TATTCGGGAT
TTAAATAAAC AAGGTATGAC GATGTTATTA ACAACTCATT ACATGGATGA GGTGGAATTT
TTATGTGATG CTTTTGGCTC TACTAAACCA GGGCGCATAG GTATTATGGA TGGCGGTAAA
TTAATTTCTT TGGGGACTTT AAAACAATTG CGTTCCGCTC ACGGCGAAGG CCTAATTATG
AAACAGTTGA GCGTGACCAC AACAAGCAAT GATAGTTCAC GAGGTTGGGA ATATTTATTT
TTTCCTTCTT TGGAAGAGGC AAATATTTAT CTAAATCAAC AGCCAGATAA AACAGGAATG
ATGGTTCGTC CCTCTAATTT AGAGGATATT TTCGTTGAGT TAACAGGAAG ACAATTAAAT
TAA
 
Protein sequence
MAAAVLLENV YKFYNNTPVV NDLSFNIEAG EIFALLGPNG AGKSTTIRML TTLTKPSQGK 
MEVAGYDVVR QPLLAKQSIG VVLQQTSVDG DLSVWENMEL HGRLHHIPNP QRQRLINQWL
DYVELADRRE SLVKTLSGGM KRRLQIARAL LHQPQILFLD EPTVGLDPQT RRRLWEIIRD
LNKQGMTMLL TTHYMDEVEF LCDAFGSTKP GRIGIMDGGK LISLGTLKQL RSAHGEGLIM
KQLSVTTTSN DSSRGWEYLF FPSLEEANIY LNQQPDKTGM MVRPSNLEDI FVELTGRQLN