Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0418 |
Symbol | |
ID | 3682637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 537575 |
End bp | 538477 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637715747 |
Product | ABC transporter-like |
Protein accession | YP_320939 |
Protein GI | 75906643 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.307879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0288734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGCTG CTGTTCTTCT AGAAAACGTC TACAAATTTT ATAACAACAC TCCTGTAGTT AATGACCTGT CATTCAACAT TGAGGCTGGA GAAATATTTG CCCTCCTCGG CCCGAACGGT GCAGGGAAGT CAACCACAAT TCGGATGCTG ACTACACTAA CAAAACCATC CCAAGGAAAG ATGGAGGTAG CTGGATATGA TGTAGTACGC CAACCTTTGC TAGCTAAGCA AAGTATTGGC GTTGTCTTGC AGCAAACTAG TGTAGATGGT GATTTAAGTG TGTGGGAAAA TATGGAACTA CATGGGAGAC TACATCACAT CCCTAACCCA CAGCGACAAC GACTAATTAA TCAATGGCTG GATTATGTTG AATTAGCAGA CAGACGGGAA AGCTTGGTAA AAACTCTGTC TGGAGGGATG AAACGAAGAT TGCAAATAGC GAGAGCTTTA TTGCATCAAC CACAAATATT GTTTTTGGAT GAACCGACGG TAGGGCTAGA CCCCCAAACT CGTCGTCGGT TGTGGGAAAT TATTCGGGAT TTAAATAAAC AAGGTATGAC GATGTTATTA ACAACTCATT ACATGGATGA GGTGGAATTT TTATGTGATG CTTTTGGCTC TACTAAACCA GGGCGCATAG GTATTATGGA TGGCGGTAAA TTAATTTCTT TGGGGACTTT AAAACAATTG CGTTCCGCTC ACGGCGAAGG CCTAATTATG AAACAGTTGA GCGTGACCAC AACAAGCAAT GATAGTTCAC GAGGTTGGGA ATATTTATTT TTTCCTTCTT TGGAAGAGGC AAATATTTAT CTAAATCAAC AGCCAGATAA AACAGGAATG ATGGTTCGTC CCTCTAATTT AGAGGATATT TTCGTTGAGT TAACAGGAAG ACAATTAAAT TAA
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Protein sequence | MAAAVLLENV YKFYNNTPVV NDLSFNIEAG EIFALLGPNG AGKSTTIRML TTLTKPSQGK MEVAGYDVVR QPLLAKQSIG VVLQQTSVDG DLSVWENMEL HGRLHHIPNP QRQRLINQWL DYVELADRRE SLVKTLSGGM KRRLQIARAL LHQPQILFLD EPTVGLDPQT RRRLWEIIRD LNKQGMTMLL TTHYMDEVEF LCDAFGSTKP GRIGIMDGGK LISLGTLKQL RSAHGEGLIM KQLSVTTTSN DSSRGWEYLF FPSLEEANIY LNQQPDKTGM MVRPSNLEDI FVELTGRQLN
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