Gene Ava_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0416 
Symbol 
ID3682635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp534586 
End bp535332 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content39% 
IMG OID637715745 
ProductNUDIX hydrolase 
Protein accessionYP_320937 
Protein GI75906641 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.255791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0628486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGAC GCAACCAAAA AAAGTTTTCA ACTTCGTTAA ATCAACAACC CTTAGCCGAT 
TTTAAGGTTG GTGTTGATAA TGTAATTTTT TCTGTAGATA CTGAAAAAAA TCGGCTGTTA
GTTCTGTTAG TAATGCGACA GCAAGAACCA TTTTTAAATT ATTGGAGTCT TCCTGGTACT
TTAGTGCGAG AAGGAGAGTC TTTAGAAGAC GCTGCTTATC GCATTATGGC AGAAAAAATT
AGAGTCAAAA ATCTCTATTT GGAACAGCTA TACACCTTTG GCGGCCCCGA ACGCGACCCA
AGGGAAGCAA CTGGCAGTTA TGGTGTACGT TACCTATCAG TTAGTTATTT TGCTCTCGTC
AGATTTGAAG AAGCCGAATT AATTGCTGAT GGTGTTACTG GTATTGCTTG GTATCCAGTC
AAGCAAGTAC CAAAGTTATC CTTTGACCAT AATGAAATTT TGGCTTATGG GCATAGACGC
TTACGCAACA AATTAGAGTA CAGTCCGGTT GCATTTGAAG TATTACCAGA AATGTTTACT
TTAAATGATT TATATCAGTT GTACACAACA GTTTTAGGCG AAAACTTCTC TGATTATTCT
AACTTTCGAG CGCGTTTACT CAAATTAGGC TTTTTATCTG ACACCGGAAT CAAAGTATCA
CGCGGCGCAG GTCGTCCCGC GAGTTTATAT AAGTTTGATG CTGAAGCCTT CGCTCCCTTC
AAGGACAAAC CTTTAGTATT TATTTAA
 
Protein sequence
MPGRNQKKFS TSLNQQPLAD FKVGVDNVIF SVDTEKNRLL VLLVMRQQEP FLNYWSLPGT 
LVREGESLED AAYRIMAEKI RVKNLYLEQL YTFGGPERDP REATGSYGVR YLSVSYFALV
RFEEAELIAD GVTGIAWYPV KQVPKLSFDH NEILAYGHRR LRNKLEYSPV AFEVLPEMFT
LNDLYQLYTT VLGENFSDYS NFRARLLKLG FLSDTGIKVS RGAGRPASLY KFDAEAFAPF
KDKPLVFI