| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0413 |
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| Symbol | |
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| ID | 3682632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 529667 |
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| End bp | 531814 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637715742 |
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| Product | PAS/PAC sensor Signal transduction histidine kinase |
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| Protein accession | YP_320934 |
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| Protein GI | 75906638 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0426655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAATG AAACACTGAA GCAGCAAATA AATCTACTCC AGCAACAAAA CGCTGAATTA
AAGCAACAGT TAGCAGCAAC CACCCAAGAA TCTAGTGCAA TTATTGCCCG ACTGGAACAG
GAACTCAGTG AATCTAAAAA CTGGTGGCTA TTTTTTGATC TATCAGTGGA TATACTCTGT
ATTACTGACT TTAATGGCTA TTTTCAGCGA GTAAATCAGG CTGGTGAAAA TATTCTGGGT
TATTCTCAAG CGGAGCTTTT ATCTTTACCC TTCATGGAGT TAGTACACCC AGAAGATAGA
GCCGCTACTT TGGCAGAAAT GTCTAAGTTA ACTGAAGAAA TTCGGGTTTT TCGGTTTGAA
AATCGCTATC GCTGCAAAGA TGGTTCCTAT TGCTGGCTAT CGTGGACTTC TGTTGCTCAC
GACAACTATA TTTTTGCTAT GGCTAGAGAT GTGACCGATA GCGTTGAGCT TCGCTTATGC
AAACAAACTG AAGCCATGCT ACGTCAACAA GAAGCCCAAT ATCGCGGCAT TTTTGAGACT
GTTAATGATG GTATCAATGT TTTTGATCTG GATACTGGTG AGATGGTTGC TGTTAATCCT
GCTTTATGTG AGATGCACGG TTATTCTCAA ACCGAGTTTC TCAGTCTCCG CCCCACAGAC
TATATTCATA CCGAGTCTTA TGATCAGTTT AAGGATTTCA TCAAAACAGT TAAATCTGGA
CAGAAATATC ATACCCAAGC TGTGGGTATC CGCAAAGATG GTACTAGCTT TGAGATAGAA
GTCACAGGAA AACTTTTTGA CTACGATGGT AGGCCTCATG CCATTTCAGT AGTGAGGGAT
ATTAGCGAGC GTATACAGTC AGAGCAAGAG CAACAAAGAT TACTAGCAAT CTTGGAAGCG
ACTCCTGATA TTGTAGGGAT TGCTGATGTT TATGGAACGA ATTGCTACTT AAATAAAGCA
GGACAGAGGA TGCTTGGTAT ATCCTCAACT GACCAGTTTC CCATCAGCGA AGCCGTAGGA
TTGTCAATAT TCGAGAAGTT TCAGACTGAG ATAATTCCTC TTGTTATGCA ACAGGGGATT
TGGTCTGGAG AAGCTTTAAT GCGATCGCGC AACGGAGAAG AGTTCCCTGT TTCTCAAGTG
ATTATTGCCC ATAAAAATGA ACAAGGGGAA GTAGAATTTT TATCCACTAT TGCCCGTGAT
ATCCGCGATC GCCAACAAAT TGAAGCCCGA CTCAGACAGC AAGCGCAAGA TTTAGAAGCA
ACTGTGCAAG AACTCCAACG CACTCAAACG CAGATGATTC AAGCCGAGAA AATGTCTAGT
TTAGGACAGT TGGTTGCTGG TGTCGCCCAC GAAATTAATA ATCCTGTTAA CTTTATCCAC
GGTAATCTCA ATTATCTTGA GGAACATACT CAAGACTTAC TGCGAATTAT TGAGGTTTAT
CAACAAAAAA ATACCAATTA CGAACCTGGT TTACAAGATT TGCATGAGGA AATCGACCTG
GAATATATCC AACAAGATTT GCCAAAAATC TTAAACTCTA TGAAGGTGGG TACTCAACGT
ATCCGCCAAA TTGTGTTGTC GTTGCGTACT TTTTCTCGCA TGGATGAAGC CGAATTTAAA
GCTGTGGACA TTCATGCAGG CATCGACAGT ACTTTGATGA TCTTACAACA TCGCCTCAAA
GAGCAACCAG AACGTCCGGC CATTCAAGTG ATTAAAGAAT ATGGGGTTTT ACCGTCAGTA
GAATGCTATG CAGGGCAACT TAATCAAGTT TTTATGAATA TTCTGGCCAA TGCCATTGAT
GCTTTAGAGG AGTCGGTTGT CAGTGGTCAG TGGTCAGTAG TTAATGCTGA AGTAACGGAC
AAGGGACAAC AAACTAATGA CATCCCCACA ATTCGGATTT CTACTTCAGT TATTGGTTCT
AATTGGATTA AGATGGCGAT CGCTGATAAC GGTATGGGTA TGTCTGAAAA AACTCAACAA
CAGATATTTA ATCCGTTTTT TACTACCAAA CCTGTGGGCA AAGGAACAGG TATGGGGATG
TCTATCAGCT ACCAAATCAT CACCGAAAAG CATGGCGGTA AACTGCTATG CAATTCCCAC
CTGGGAAAGG GTACAGAATT TATCATTGAA ATTCCTATTC AACAATAA
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| Protein sequence | MYNETLKQQI NLLQQQNAEL KQQLAATTQE SSAIIARLEQ ELSESKNWWL FFDLSVDILC
ITDFNGYFQR VNQAGENILG YSQAELLSLP FMELVHPEDR AATLAEMSKL TEEIRVFRFE
NRYRCKDGSY CWLSWTSVAH DNYIFAMARD VTDSVELRLC KQTEAMLRQQ EAQYRGIFET
VNDGINVFDL DTGEMVAVNP ALCEMHGYSQ TEFLSLRPTD YIHTESYDQF KDFIKTVKSG
QKYHTQAVGI RKDGTSFEIE VTGKLFDYDG RPHAISVVRD ISERIQSEQE QQRLLAILEA
TPDIVGIADV YGTNCYLNKA GQRMLGISST DQFPISEAVG LSIFEKFQTE IIPLVMQQGI
WSGEALMRSR NGEEFPVSQV IIAHKNEQGE VEFLSTIARD IRDRQQIEAR LRQQAQDLEA
TVQELQRTQT QMIQAEKMSS LGQLVAGVAH EINNPVNFIH GNLNYLEEHT QDLLRIIEVY
QQKNTNYEPG LQDLHEEIDL EYIQQDLPKI LNSMKVGTQR IRQIVLSLRT FSRMDEAEFK
AVDIHAGIDS TLMILQHRLK EQPERPAIQV IKEYGVLPSV ECYAGQLNQV FMNILANAID
ALEESVVSGQ WSVVNAEVTD KGQQTNDIPT IRISTSVIGS NWIKMAIADN GMGMSEKTQQ
QIFNPFFTTK PVGKGTGMGM SISYQIITEK HGGKLLCNSH LGKGTEFIIE IPIQQ
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