Gene Ava_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0402 
Symbol 
ID3682680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp517237 
End bp519180 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content44% 
IMG OID637715731 
Productprotein serine/threonine phosphatase 
Protein accessionYP_320923 
Protein GI75906627 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0808498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCTA TCGAACGGAT AATTTATTGC ATAAATAAAA ACTGTGATAA TCCGATTAAT 
TTTGCGGGAG AACGTGTTTG CGCTAGTTGT CAAACGCCTT TAGTTCACCG CTATCTTTGG
GCTACTGGCT CATTAGCAAC CGAGATTCCA CTAGGTACAA AAGTATCAGA TAGGTATGAG
GTAATAGAAC GCCAGGTTTG GCTGGACACT CGGCCGGGAT TGCTTCCAGA GGTACCTCAA
GAATTGCCGC CGGATGTTAT TCCTTATCTT CGCTTATATC CAGAGCGATC GCATCTCCCC
CAAGTCTATG GTTTTGTTAC CTCTTCACCA GAAGGCGCAG ACAATACCCT GTTACTAGAA
AATGTCCCCA TAGATGAGGA AGGAAATATT TATCCAACTA TCATCGATGC CTGGGAAAAA
GCCAAACCAG TCAGACAAGT TTACTGGTTA TGGCAGATTC TCCAACTGTG GACACCTTTA
CTGGAGTTAG GACTAGCTCA CAACTTGCTG AGAGCAGACA ATTTACGTGT CCAAGGCTGG
TGTGTGCGAC TGTTAGACCT TAACGCCAAA ACACCCACAG AACAGCCTAA TTTAAAAGAT
TTGAGCGATT CTTGGCAGCC TCTACTAGAG TTGACAACAA CTTCCGTTAC GTCAAAGTTG
CAGAATATCA TCCAGCAGAT GGCTAACTCA GAAGTAGAGT TAGAAACTAT TGCGACTCAA
CTTAATGCTT TATTACTCGC CGTCGCCGGA GAATTGCCAT TAACTTTAAC CATAGCAGGG
GCGACAGATG CAGGCCCCCA ACTCAAACAA AATGAAGATA CTTGCTATCC CAATACTGCT
GTTGACTCCC ATGAATTATT AGTACCAAAT TTGGCGATCG TTTGTGATGG CATCGGCGGA
CATCAAGGGG GTGAAGTCGC CAGCCAATTA GCAGTGCAGT CTCTAAAATT GCAAATTCGG
GCTTTATTCA CCGAAGTAGC CGCACAGCCA GAAATTGTCC CACCAACTTT GTTACAGGAA
CAACTAGAAG CTAGCCTGCG TGTGGCTAAC AACCTCATTA ATTCCCGTAA TGATGAACAA
AAGCGCCAAG GTAGAGAACG CATGGCCACA ACCCTGGTGA TGGCAGTACA AGTACCGCAA
CGAGTATTAA CTACATCTGA GTGGCAATCA GATAATGGCC ATGAGCTTTA TTTGGCTAAT
GTGGGTGATA GCCGTGCTTA TTGGATCACT TGTGAATATT GCCAACAGCT GACAGTAGAC
GATGATATAG TCACTAGGGA AGTCCGTTCT GCCCGGAGTT TGTATCGGCA GGCACTCCAG
CGACAAGATG CCAATGCTTT AACTCAAGCC TTGGGAAACA GAGATGCTGA ATCTTTACGG
TTGGCGATTA AGCGATTCAT CATCGATGAA GATGGGATTT TATTATTATG TTCTGATGGG
TTAAGTGATA ATAACTGGGT AGAAAATTCT TGGCAAGATT ACGCTGTACC AGTATTAACT
GGTCAAATGA CTGTTGAAGA TGCTGCCCAC CATTGGATTA ATCTAGCCAA TGAGAAAAAT
GGCCATGATA ATACTTCTGT TGTGCTGACT CTTTGCCGTG TTTCTAAAGA ATATTTAGTG
CCAATCACAC CAACGCCGCC ACTGGTAGAG ATTCCAGAAC CAGAAATAGC AGAACTGGAA
AGATACCCAG AAGAATCTAT CTTGACGGAA AGTTCTCAAG CATTGCTGGA TTTGGAACTT
CCAGATGAAC CCAGCCCAGC CCCAATTAAA CAACCAAACC GCCGTCAACC TTTATTATTG
GTTGGGGGAT TATTGGCGTT ACTAATAGGA GGTACAGGTA TAGGATTATT TGCTTGGTGG
CAACTTAGTC CCCAATCATT TCAGCAGATG TGTCAGAAAC TACCCCCATC ATTGCAGCAA
TATTGTTCAC CCAGGGGTAG ATGA
 
Protein sequence
MLSIERIIYC INKNCDNPIN FAGERVCASC QTPLVHRYLW ATGSLATEIP LGTKVSDRYE 
VIERQVWLDT RPGLLPEVPQ ELPPDVIPYL RLYPERSHLP QVYGFVTSSP EGADNTLLLE
NVPIDEEGNI YPTIIDAWEK AKPVRQVYWL WQILQLWTPL LELGLAHNLL RADNLRVQGW
CVRLLDLNAK TPTEQPNLKD LSDSWQPLLE LTTTSVTSKL QNIIQQMANS EVELETIATQ
LNALLLAVAG ELPLTLTIAG ATDAGPQLKQ NEDTCYPNTA VDSHELLVPN LAIVCDGIGG
HQGGEVASQL AVQSLKLQIR ALFTEVAAQP EIVPPTLLQE QLEASLRVAN NLINSRNDEQ
KRQGRERMAT TLVMAVQVPQ RVLTTSEWQS DNGHELYLAN VGDSRAYWIT CEYCQQLTVD
DDIVTREVRS ARSLYRQALQ RQDANALTQA LGNRDAESLR LAIKRFIIDE DGILLLCSDG
LSDNNWVENS WQDYAVPVLT GQMTVEDAAH HWINLANEKN GHDNTSVVLT LCRVSKEYLV
PITPTPPLVE IPEPEIAELE RYPEESILTE SSQALLDLEL PDEPSPAPIK QPNRRQPLLL
VGGLLALLIG GTGIGLFAWW QLSPQSFQQM CQKLPPSLQQ YCSPRGR