Gene Ava_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0398 
Symbol 
ID3682676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp514535 
End bp515389 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content36% 
IMG OID637715727 
Producthistidine triad (HIT) protein 
Protein accessionYP_320919 
Protein GI75906623 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.315945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC AAAAAAATCA ATTCAGCCAT CTCACCGCCA TTGAAAGAAC TTATCTATCA 
TTTCCTGCAC AGTTTTTAAT CAATCAAAAC CTGCTACAAG GACAAATATT AGACTTTGGT
TGTGGATTTG GTAATGATGT TAAATTATTG CAGCACAAAG GCTTTGATAT TAGAGGTTAC
GACCCTTATT ATTTTCCTCA ATATCCTGAA AATAAATTTG ACACTATAAT TTGCTTGTAT
GTTTTAAATG TTTTATTCCC TGAAGACCAA GCTAATATCC TCATGGATAT AGCCTACTTA
TTAAAACCAG GAGGTAAAGC GTATTATGTA GTCAGAAGAG ATATTAAAAG GGAAGGATTT
CGGGAACATT ATATTCATAA AAAACCTACA TATCAATGTC TTGTTAAACT GCCTTTTCGC
TCAATTCATT TAGATGAAAG CCGAGAAATA TATGAATACA CCCACTATAA TAACCAGCGC
CATTCATCTA ATTACTGTAT ATTTTGCAAT CCCCATAAAA ACTTAAAATT ATTAACAGAA
TCAGCAACCG CCTACGCTAT ATTTGATGGT TATCCGATCA GCAAAGGACA TACATTAGTT
ATTCCCAAAC GCCATGTTAG CGACTACTTC GAGCTACCCC AAAAAGAGCA ATCAGCCTGT
TGGTTAATGG TGAATAAAGC ACAGGAATTT CTAAAAGCCG AGTTTTCCCC TGATGGCTTT
AATATAGGTA TGAACATCAA TCGAGCCGCC GGACAAAATA TTATGCACGC GAGTATCCAC
ATCATCCCAC GTTATCAAGG TGATGCGATA GGAGCGAAAA GTGGCATAAG AAACGTTATC
CCTCAAAGAA AATAG
 
Protein sequence
MKQQKNQFSH LTAIERTYLS FPAQFLINQN LLQGQILDFG CGFGNDVKLL QHKGFDIRGY 
DPYYFPQYPE NKFDTIICLY VLNVLFPEDQ ANILMDIAYL LKPGGKAYYV VRRDIKREGF
REHYIHKKPT YQCLVKLPFR SIHLDESREI YEYTHYNNQR HSSNYCIFCN PHKNLKLLTE
SATAYAIFDG YPISKGHTLV IPKRHVSDYF ELPQKEQSAC WLMVNKAQEF LKAEFSPDGF
NIGMNINRAA GQNIMHASIH IIPRYQGDAI GAKSGIRNVI PQRK