Gene Ava_0391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0391 
Symbol 
ID3682669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp505598 
End bp506926 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content40% 
IMG OID637715720 
Producthypothetical protein 
Protein accessionYP_320912 
Protein GI75906616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.762631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.486737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGC TCAAAATCCC GAAAAAAACC TCAACTGCTT TGATTAATTC ACTAGGTGCA 
GGAGTAGTAC CCAGATTAGG AGTAGAACAT ATAGCAGTTG GTCGAGAAAA AGAACTGAAA
AGCCTATTAC AAAATCTCAA TGATATTGCC GAAGGCGTGG CAGCATTTCG TTTTATCATT
GGTAACTATG GCGCGGGAAA AAGCTTCATC CTCCAGATGG TTCGTAACCG AGCAATGGAG
CAAGGTTTTG TAGTTGCTGA TGTTGATTTA TCTTCTGAAC ATCGCCTAGC AGGAAGCAAC
AATGAAGGTC TAGCGACCTA TCGAGAATTG ATGAGTAGCC TTTCCACCAA AACCCGTCCT
GATGGTGGTG CGTTAGTTTC AATTCTAGAA GGATGGATTA ACAAAATTCA GCAAGAGGTC
GTTAAAGAAA CTGAGCTACG TCCCAATGAT GAGGGTTTTG ATGATCAAGT GGAAGCCAAA
ATTCGAGAAG TTGTTCAGTA TATAGAAGAC TTAGTTCATG GATTTGATTT TGGTAGTATT
ATTATTGCCT ATTGGCGTGG CTACCGCTTA GATGATGATG ATTTAAAAAA TTCTGCACTG
CGCTGGTTAC GGGGAGAATT TAATACTAAA ACTGAAGCCA GGACAGCTTT GGGCGTAAGG
ATAATCATTG ATGATGATAG CTGGTATGAC TATATTAAAC TCCTAGCTAA ATTCGTGGCA
GAGATTGGTT ATAAGGGATT ACTAATTTTA ATGGATGAAG CAGTTAATCT TTACCAAATA
TCTACTACAG TTACTCGTGA GAAGAACTAT AACAGATTAC TAGCAATGTT TAATGACACT
ATGCAGTGTA AAGCAGAACA TTTAGGTATT GTTATAGGTG GGACAACAAA GTTTTTAGAA
GACCCTAATC GAGGACTTTT TGCAGACCAA GCTTGGCGTA GACGCACAAA AGAGAGCCGC
TTTGCTGCAC AAGCAGATAT ACAAGAGTTT ATTGGGCCGG TTATCCGCCT GAATCCTTTA
AGTGAAGCAG AAATTCTGAC ACTTTTGCAG CGTTTAACTG AAATTCACGC CCTCCATTTT
GGTTATGACA AGATTTTGAC CAACAAAGAA TTACAAGAAT TTGTCAAAGA AATCGTCAGT
CGTTTAGGCG CAGAAGCATT ATTAACACCA GGAGAGATTG TGAGGGATTT TATTAGTGTG
TTGAACATCC TACACCACAA TCAAAACATT AAGTTTAGCG AGCTAATTCA CGGTTCTAGT
TTTAAACCTA CTGCTGTGGG TAAAGATATC GGTGTAGACG AGGATAATGC AGCCGAATTT
AGTTTGTGA
 
Protein sequence
MAKLKIPKKT STALINSLGA GVVPRLGVEH IAVGREKELK SLLQNLNDIA EGVAAFRFII 
GNYGAGKSFI LQMVRNRAME QGFVVADVDL SSEHRLAGSN NEGLATYREL MSSLSTKTRP
DGGALVSILE GWINKIQQEV VKETELRPND EGFDDQVEAK IREVVQYIED LVHGFDFGSI
IIAYWRGYRL DDDDLKNSAL RWLRGEFNTK TEARTALGVR IIIDDDSWYD YIKLLAKFVA
EIGYKGLLIL MDEAVNLYQI STTVTREKNY NRLLAMFNDT MQCKAEHLGI VIGGTTKFLE
DPNRGLFADQ AWRRRTKESR FAAQADIQEF IGPVIRLNPL SEAEILTLLQ RLTEIHALHF
GYDKILTNKE LQEFVKEIVS RLGAEALLTP GEIVRDFISV LNILHHNQNI KFSELIHGSS
FKPTAVGKDI GVDEDNAAEF SL