Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0389 |
Symbol | |
ID | 3682666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 503075 |
End bp | 503572 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637715717 |
Product | HNH endonuclease |
Protein accession | YP_320910 |
Protein GI | 75906614 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.235309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.408465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAGG TTTTAGTCCT AAACGCCTCT TACGAACCGC TCAACATAAC GAGCTGGCGA CGCGCTGTAG TTCTGTTAAT CAAAGGCAAA GCAGAACGCG TTGAACATAA CGGTAGTTTT CTTTACTCAG ACTTTCCGTT ACCAACTGTA ATCCGGTTGC GTCATTACGT CCGCGTTCCA TACAAGGAAA TTCCTCTGAC CCGTCGCAAT ATATTGCATC GTGACGGACA TACTTGCCAA TACTGTGGCT ATACCGGGGA CGAACTGACA TTGGATCATG TAAATCCGCG ATCGCGCGGC GGTGGTGATA GCTGGGAAAA TATTGTAACG GCTTGCGTGC GTTGCAATGT CAAGAAAGGC AGTCGCACAC CCCAAGAGGC ACGTATGCCT TTGCGCCATC TTCCTCGTCA ACCCTATAGC AGTCTGTATT TTGAGGTCAG CAAGCATCTC AAAAATGGAT TGCATCAAGA GTGGCAAAAA TATGTTATAG GACTTTGA
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Protein sequence | MGKVLVLNAS YEPLNITSWR RAVVLLIKGK AERVEHNGSF LYSDFPLPTV IRLRHYVRVP YKEIPLTRRN ILHRDGHTCQ YCGYTGDELT LDHVNPRSRG GGDSWENIVT ACVRCNVKKG SRTPQEARMP LRHLPRQPYS SLYFEVSKHL KNGLHQEWQK YVIGL
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