Gene Ava_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0389 
Symbol 
ID3682666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp503075 
End bp503572 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content47% 
IMG OID637715717 
ProductHNH endonuclease 
Protein accessionYP_320910 
Protein GI75906614 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.235309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.408465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGG TTTTAGTCCT AAACGCCTCT TACGAACCGC TCAACATAAC GAGCTGGCGA 
CGCGCTGTAG TTCTGTTAAT CAAAGGCAAA GCAGAACGCG TTGAACATAA CGGTAGTTTT
CTTTACTCAG ACTTTCCGTT ACCAACTGTA ATCCGGTTGC GTCATTACGT CCGCGTTCCA
TACAAGGAAA TTCCTCTGAC CCGTCGCAAT ATATTGCATC GTGACGGACA TACTTGCCAA
TACTGTGGCT ATACCGGGGA CGAACTGACA TTGGATCATG TAAATCCGCG ATCGCGCGGC
GGTGGTGATA GCTGGGAAAA TATTGTAACG GCTTGCGTGC GTTGCAATGT CAAGAAAGGC
AGTCGCACAC CCCAAGAGGC ACGTATGCCT TTGCGCCATC TTCCTCGTCA ACCCTATAGC
AGTCTGTATT TTGAGGTCAG CAAGCATCTC AAAAATGGAT TGCATCAAGA GTGGCAAAAA
TATGTTATAG GACTTTGA
 
Protein sequence
MGKVLVLNAS YEPLNITSWR RAVVLLIKGK AERVEHNGSF LYSDFPLPTV IRLRHYVRVP 
YKEIPLTRRN ILHRDGHTCQ YCGYTGDELT LDHVNPRSRG GGDSWENIVT ACVRCNVKKG
SRTPQEARMP LRHLPRQPYS SLYFEVSKHL KNGLHQEWQK YVIGL