Gene Ava_0381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0381 
Symbol 
ID3682716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp495473 
End bp496585 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content46% 
IMG OID637715709 
Productribosome-associated GTPase 
Protein accessionYP_320902 
Protein GI75906606 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTTT TCACCACTGG ACAGTTATTG GGTACGGTTG TAGCCGTGCA AGCCAATTTT 
TACAAAGTAC AGTTAGACCA AGATGTGAGG GAGCCGGGGA GCAGAGGAGC AGGGGAAGAG
GTACATTTAG ATTCTCCTTT GCCCCTCTAT CCTCTGTCTC TTCTTCTTTG TACTCGCAGA
ACCCGATTGA AAAAAATCGG GCAACAGGTG ATGGTGGGCG ATCGCGTGGT TGTAGAGGAG
CCAGATTGGG CAGGAGGACG GGGGGCGATC GCTGAGGTTT TATCGCGGCA AACTCAGTTA
GATAGACCGC CAATCGCCAA TGCTGACCAA ATCCTACTGG TTTTTGCTGT GGCTGATCCT
CCCCTAGAAC CTTATCAACT CAGCCGATTT CTCGTGAAGG CGGAAACCAC TGGTTTAGAT
GTGGTTTTAT GCTTAAATAA AAGCGATCTA GTTTCACCAG AAATACAGCA ACAAATTAGC
GATCGCCTAT TAGCTTGGGG TTATCAACCC TTATTTATTA GCGTCGAAAA GCAAATAAAT
ATTGACCAAA TCGCCAAATA TCTCAGCAAT AAAATTACTG TAGTTGCTGG CCCTTCCGGT
GTGGGTAAAT CTAGCTTGAT TAATGCTCTG ATTCCCGACA TTAACCTGCG CGTGGGGGAG
GTTTCCGGTA AACTGGCTCG TGGTCGTCAT ACCACCCGCC ATGTGGAGTT ATTTGAGTTA
CCCAACGGTG GTTTACTGGC AGATACGCCG GGATTTAATC AGCCTGATGT GGATTGTAGC
CCAGAAGAAT TAGTACATTA TTTCCCAGAA GCCAGAGAAC GTTTAGCTGT TGCTAGTTGT
CGGTTTAACG ACTGCTTACA TCGAGACGAG CCAGATTGTG CTGTGCGTGG TGATTGGGAA
CGATACGAAC ATTATCTAGA ATTTTTAGCA GATGCGATCG CCCGGCAAAC TCAACTTTAC
CAACAAGCCG ATCCCGAATC TACATTAAAG CTCAAAACCA AAGGCAAAGG TCAAAGCCAA
TATGAACCCA AACTAGAAAG TAAAAAATAT CGCCGCACCT CCCGACGCAC TCAAGTACAA
GGTTTGCAAG ATTTGTATCA AGAGGAAGAG TAG
 
Protein sequence
MRVFTTGQLL GTVVAVQANF YKVQLDQDVR EPGSRGAGEE VHLDSPLPLY PLSLLLCTRR 
TRLKKIGQQV MVGDRVVVEE PDWAGGRGAI AEVLSRQTQL DRPPIANADQ ILLVFAVADP
PLEPYQLSRF LVKAETTGLD VVLCLNKSDL VSPEIQQQIS DRLLAWGYQP LFISVEKQIN
IDQIAKYLSN KITVVAGPSG VGKSSLINAL IPDINLRVGE VSGKLARGRH TTRHVELFEL
PNGGLLADTP GFNQPDVDCS PEELVHYFPE ARERLAVASC RFNDCLHRDE PDCAVRGDWE
RYEHYLEFLA DAIARQTQLY QQADPESTLK LKTKGKGQSQ YEPKLESKKY RRTSRRTQVQ
GLQDLYQEEE