Gene Ava_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0377 
Symbol 
ID3682712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp490595 
End bp491341 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content44% 
IMG OID637715705 
Productheat shock protein GrpE 
Protein accessionYP_320898 
Protein GI75906602 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG AAAATAAACA GGTAAACCAT ACAAGCCAGC AATTGGGTGA ATCAACAGAG 
GTAAAGCAAG CAATTATGAG TGAATCCCCA GCCCAAATTA ACAATAACGA ATCTACTAAC
GAAGTAACTG AGTCAGTGGC AATCCCCACA AATGTAGTGG GAGACACTAC AGCTACAGAA
GATAATGGCT TCACAGCAAC ACAGATACAG GAAGCGAATA CAGCTGCTTT GGCTGAATTG
ACTCAACAGA TCAATTCTCT CAAAACACAG TTAGATGAAC GCAGTACGCA ATATATGAGG
ATTGCGGCAG ATTTTGAAAA TTACCGCAAG CGTACTCAAA AAGAAAAAGA AGAGTTGGAC
TTACAGGTAA AACGCAACAC AATTTTGGAA TTGCTACCTA TTGTCGATAA TTTTGAGCGG
GCGCGATCGC ATCTTAAGCC ACAAACTGAA AGTGAGATGA CAATTCACAA AAGTTATCAA
GGAGTATACA AACAACTAGT AGATTCCCTG AAGCGCCTGG GTGTATCACC AATGCGCCCC
GAAGGACAAG AGTTTGACCC CAACCTTCAT GAAGCAGTAA TGCGGGAACC TACGGATGAA
CATCCTGAAG GAACAGTGTT AGAAGAGTTA GTGCGCGGAT ATTACTTGGG CGATCGCGTG
CTACGCCATT CTATGGTCAA GGTGGCTGCT CCAAAGGAAG ATACGCTCCC TGCACAAGAA
AATCAGTCGA GTCCAGCCGA CAGTTAA
 
Protein sequence
MIDENKQVNH TSQQLGESTE VKQAIMSESP AQINNNESTN EVTESVAIPT NVVGDTTATE 
DNGFTATQIQ EANTAALAEL TQQINSLKTQ LDERSTQYMR IAADFENYRK RTQKEKEELD
LQVKRNTILE LLPIVDNFER ARSHLKPQTE SEMTIHKSYQ GVYKQLVDSL KRLGVSPMRP
EGQEFDPNLH EAVMREPTDE HPEGTVLEEL VRGYYLGDRV LRHSMVKVAA PKEDTLPAQE
NQSSPADS