| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0375 |
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| Symbol | |
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| ID | 3682710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 487009 |
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| End bp | 488127 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637715703 |
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| Product | pilus retraction protein PilT |
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| Protein accession | YP_320896 |
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| Protein GI | 75906600 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGA TGATTGAAGA CTTGATGGAG CAGATGATTG AAATGGGTGG CTCGGATATG
CACTTATCCG CAGGTTTGCC TCCCTATTTC CGCATCAGTG GCAAACTCAC ACCCATAGGC
GAAGAGGTGC TGACCGCCGA CCAGTGCCAA AGACTGATTT TTAGTATGCT CAATAACACC
CAACGTAAAA CCTTAGAGCA GACTTGGGAG TTAGATTGTT CCTATGGTGT CAAAGGTTTA
GCCCGTTTCC GGGTCAATGT TTATAAAGAG CGTGGTGCTT ATGCTGCTTG TCTAAGGGCG
CTCAGTTCCA AAATTCCTAA CTTTGAAAAG TTGGGTTTAC CCGATGTTGT GCGGGAAATG
TGCGACAAAC CTAGAGGGTT AATTCTCGTC ACAGGGCCGA CAGGTTCCGG TAAAACAACT
ACTCTGGCGG CAATGATTGA CTTAATTAAC CGCACGAAGG CAGAGCATAT CCTCACAGTA
GAAGACCCAA TTGAGTTTGT ATACGAACCA ATTAAAAGCT TAGTTCACCA AAGACAGTTA
GGCGAAGATA CCAAAAGTTT TGCAAACGCT TTAAAAGCGG CTTTACGGGA AGATCCAGAT
ATTGTTTTGG TAGGGGAAAT GCGGGATTTG GAGACAATTT CTTTGGCGAT TTCTGCCGCA
GAAACCGGAC ACTTAGTATT TGGTACGCTG CACACTAGTT CTGCTTCCCA AACTGTTGAC
CGGATTATCG ACGTTTTCCC CCACGAAAAA CAAACTCAAG TGCGGGTACA GTTATCTAAC
TCTTTAGTAG CTGTATTTAG CCAAACATTA GTGCCGAAGA AAAATCCCAA GCCCGGTGAA
TACGGACGCG TTATGGCACA AGAAATTATG GTTATTACTC CTGCTATTTC TAACCTGATT
CGTGAAGGTA AAACCTCACA AATTTATTCC GCAATTCAGA CTGGCGGTAA ATTAGGAATG
CAAACATTAG AAAAAGTTTT AGCTGATTTT TATAAATCAG GCACAATTTC CTTTGAAGCA
GCAATGTCTA AGACCTCAAA ACCAGATGAA ATTCAACGCC TTATAGGTCC CTCGGCTCCA
CCGGCAAATG CTAAACCTGG AGCCGTCAAA GCACACTAA
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| Protein sequence | MEMMIEDLME QMIEMGGSDM HLSAGLPPYF RISGKLTPIG EEVLTADQCQ RLIFSMLNNT
QRKTLEQTWE LDCSYGVKGL ARFRVNVYKE RGAYAACLRA LSSKIPNFEK LGLPDVVREM
CDKPRGLILV TGPTGSGKTT TLAAMIDLIN RTKAEHILTV EDPIEFVYEP IKSLVHQRQL
GEDTKSFANA LKAALREDPD IVLVGEMRDL ETISLAISAA ETGHLVFGTL HTSSASQTVD
RIIDVFPHEK QTQVRVQLSN SLVAVFSQTL VPKKNPKPGE YGRVMAQEIM VITPAISNLI
REGKTSQIYS AIQTGGKLGM QTLEKVLADF YKSGTISFEA AMSKTSKPDE IQRLIGPSAP
PANAKPGAVK AH
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