| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0374 |
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| Symbol | |
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| ID | 3682709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 485684 |
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| End bp | 486907 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637715702 |
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| Product | type II secretion system protein |
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| Protein accession | YP_320895 |
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| Protein GI | 75906599 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.777573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACAT TTATTGCCCA AGTTCGAGAC ACGCAAGGAA AAACTAGAAA AGAGAAAGTT
GTTGCTGAAT CTTTAGCACA AGCTCGGACT AATCTGAGAG ATCAGGGATT AGTCGTTCAA
GAACTTAAGC AGTCGCAAAA CTTTGCTGCC AATTTTGATT TGCAAAAGTT TCAGAATTCC
TTCGTCAAGG TAACAGTGAA GGAAAAGGCC GTGTTTTCTC GACAACTTGC CACATTGGTA
AATGCTGGTG TAGCAATTGT CCGAGGACTA GGAGTATTAG GTGATCAGTG TACCAATGCT
AAACTTAAGC AAGCCCTCAA TGATATTAGC AATGACGTTC AAAGTGGGGT CAATCTTTCG
GATGCTATGC GTAAGCATCC TGACTGTTTT GATGGTTTGT ATGTGAGCAT GATTCAAGCT
GGGGAAGTCG GTGGTGTTCT AGATGAAGTT TTGAATCGTT TAGCCAAATT GTTAGAGGAT
ATGGCTCGAT TACAAAACCA ACTTAAATCA GCCCTAGCTT ATCCCGTTGT TGTGGGTATT
TTAGCAACCG CCATTTTCGT GGGGATGACT GTTTTTCTTA TCCCCATTTT TGCTAAGATT
TTCGTGGAAT TAGGTACAGA ATTACCAGCC CTTACCCAAT TCTTAATGAA TTGCAGCGAG
ATTTTGAGAA GTTGGCGAGC AGGACTGATT GTTGCTGTGA TTGTAGGCAC AAAATTTAGT
TATACACAGT ACTATAAAAC CCGTGTTGGT AAAGAAACAA TTGACCGTCT TGCTTTAAAA
ATGCCCTTAT TTGGTGACTT AATTCAAAAG TCTTCAGTTG CTCGTTTCAG CCGTACTTTT
GGTTCTCTAA CTCGTTCTGG TGTACCGATT CTCACCTCTT TGGAAATTGT GCGCGATACC
TCTGGAAATC AGGTAGTTGC TAATGCTATT GATGCGGCAA GAGCCGAAAT TCAACAAGGT
GGTATGATTA GTATTGCTTT ACAAAAAGAG CAAGTTTTTC CACCAATGGC AATTCAAATG
ATTAGCATCG GTGAAGAAAC CGGGGAATTA GATGGAATGC TGATGAAAAT TGCCGATTTC
TATGAAGATG AAGTCGAGCA AGCAGTCAAA GCATTAACCA GCGTTTTAGA ACCAATTATG
ATTTTGGTTC TAGGGGGTAT GGTGGGGACA ATCTTGTTAT CAATGTATCT GCCTCTGTTC
AAAGTATTTG AAAAATTGGG ATAA
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| Protein sequence | MPTFIAQVRD TQGKTRKEKV VAESLAQART NLRDQGLVVQ ELKQSQNFAA NFDLQKFQNS
FVKVTVKEKA VFSRQLATLV NAGVAIVRGL GVLGDQCTNA KLKQALNDIS NDVQSGVNLS
DAMRKHPDCF DGLYVSMIQA GEVGGVLDEV LNRLAKLLED MARLQNQLKS ALAYPVVVGI
LATAIFVGMT VFLIPIFAKI FVELGTELPA LTQFLMNCSE ILRSWRAGLI VAVIVGTKFS
YTQYYKTRVG KETIDRLALK MPLFGDLIQK SSVARFSRTF GSLTRSGVPI LTSLEIVRDT
SGNQVVANAI DAARAEIQQG GMISIALQKE QVFPPMAIQM ISIGEETGEL DGMLMKIADF
YEDEVEQAVK ALTSVLEPIM ILVLGGMVGT ILLSMYLPLF KVFEKLG
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