Gene Ava_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0369 
Symbol 
ID3682704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp478887 
End bp479510 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content43% 
IMG OID637715697 
Productexopolysaccharide synthesis, ExoD 
Protein accessionYP_320890 
Protein GI75906594 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGC TATCTAACGA ATTACAACGC CACTTTTTTG AAGAAGAAAG ACCAGAAAAA 
GTAACTTTAG CAGATATTCT GTTGCTGGCT GGGGAAAGGA TTTTTGGCTT TTTGCTGGTA
ATCTTGTCTC TACCATCAGC TTTGCCTGTC CCTGCACCTG GTTATTCAAC ACCCTTTGGT
GTCCTAATTT TTCTATTAGC TGTTCAGCTC ATCGCTGGTG CTAAAAGCCC TTGGCTACCA
CAAAAAATGA TGAATCACCC AATTGAACTG CAAACAGTCC AGAAGTTCCT GAAGGCGGGA
ATTCCTTGGT TAAAAAGAAT TGAGGCGATC GCCCGTCCTC GTTTATCTTA TATCTGTACT
ACTCTAGCAG GTAGGATAAC AATTGGGATT GCGATCGCCT TGATGGCAAT TTCTATGATG
ATTCCCATCC CCGGAACTAA CACCTTACCC GCAATGGGTA TTTTCGTGAC TGGTTTTGGT
TTATTAGAAG ACGATGGTGC AATTAGTTTA GGTGGCTTAG TTCTCTGTGT CATGGGAGCA
ATTTTAACTA CTTCCATTCT CATGGCTTTA GCTTGGGGCG GTTCCAGTCT TTTAGATATC
ATCAAGACTT GGTTGGGAAG ATGA
 
Protein sequence
MAKLSNELQR HFFEEERPEK VTLADILLLA GERIFGFLLV ILSLPSALPV PAPGYSTPFG 
VLIFLLAVQL IAGAKSPWLP QKMMNHPIEL QTVQKFLKAG IPWLKRIEAI ARPRLSYICT
TLAGRITIGI AIALMAISMM IPIPGTNTLP AMGIFVTGFG LLEDDGAISL GGLVLCVMGA
ILTTSILMAL AWGGSSLLDI IKTWLGR