Gene Ava_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0354 
Symbol 
ID3682728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp454940 
End bp456982 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content45% 
IMG OID637715682 
Productputative protein serine/threonine phosphatase 
Protein accessionYP_320875 
Protein GI75906579 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.526454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTT GCCCTCAGTG TGAATTTGAA AACCCTAATG CTAACAAGTT TTGTCAAAAA 
TGTGGTGCTT CTTTGTCCCA CAAGGTTTGT CCTCAATGCA GCACTGAAGT ACCAGTGAAT
GCTGAGAATT GTCATAACTG TGGTGCAGAA ACCGGCACAG TATGGCGGGC GATTATCGAG
ACTGGTGATT GGGCTGCCGC CGTAAGTGTC AGCACTTTAC TGAGCGCCAA CCCTGTTGAT
GTAGCGTCCC CCAAGGAAGA CCAAACAGAA TTAGGGTTTG AGGAAGACGG AGAAGAGAAG
ATCATGCTGT CTCCAGCATT ATTCTCTGTT GGCTCATATT TGGACAAAGA ACAACGCTAT
CAGATTTTGC AAGTACTATC AGCCGCACAT GATGAGGTTA GCGTTAGGGT TTTGGACTGT
CAACCATACC AAGTGTCACC AATTGAAGCA ATATTAGCTA ATCAGCAACA GGGATTGGTG
ACTCCAGCAG TGGAAGCCAA TGGTATTCCC AGTTTGGCTA GGGCTTATAT GGTTTTACAA
TCCCAAAATC ACACGGAAAT TCCCCGGATT CATGATGCTT GGGAGGACGG CGATAACCAG
ATATTACTTA TTGAAGACCG CACTCACTAC CAGCCTTTAC TTGATTTATG GCAAAAGGAA
ACCACTAGTT CGCTAGAAAT TTTACACTGG TTTTATCAAA TGACCCAACT TTGGGTATTA
CTAGAACCCT TAAAGTGTCA CTACAGTTTG TGGGATTTGG CGAATTTGTG CTTAGATGAA
GACCAGACAA TTAGCTTACG GAAACTGTAC GTAAAACCAC CTAAGAGCGA GTTAGCGATT
GACTACTTGC CACTGGACTT TAATCCGGTA ACAGCACAAG AAGAGGATGT AACATTGCCT
ATCTTTGTGC AGCCCTCAAG TATTAAAGCC TTGGGAGAAG TTTGGCAGGC GCTATTTAGA
GAGTCTCAAC GCACTCAATT TGGTTCCATC ATACAGATTT TAGGAGATTT GCAGCAGGGT
AGGATTTACT CGATCGCTCA ATTGCGATCG CGTTTACAAG AAGTCGCCAC GGAACTAGAA
GCAACTACAC CCCCAATATT TGAGCCAATG GAAGCAGAAC AAACGAATGC GCCCACAGTC
TTACAAGCAG ATGATACAGA AGATCCCTCT GGCAAGGGTG ATGATATGCC CACGGTAGTG
CTGTCCGTGC AGTTAAGCAG TTTAGAAGAT GCTGGCCGCA CTGATGTTGG TCGTCAACGC
CATCACAATG AGGACTACTT TGGGATTGAA ACTAAAACAG AAAAATTAGA ACTGCCGAGA
AACCGCATTT TACAAGCTCG TGGCTTGTAT ATTCTTTGTG ATGGTATGGG CGGACACGCT
GGCGGTGAGG TGGCTAGCGA GTTAGCCGTA ATCACCTTAC GCCAATACTT TCAGCAACAC
TGGACTAATA ACCAATTACC AACAGAAGAA ATAATTCGTG AGTCAGTTTA TCTGGCTAAT
GAAGCAATTT ACGAAAAAAA CCAACAAGAA GCCCGTTCTG GGGTAGGACG TATGGGTACT
ACCTTGGTCA TGCTATTAGT TCAAGGTAGT CAAGCAGCTG TTGCCCATGT GGGTGATAGC
CGCCTATACC GTGTGACTCG TAAGCGGGGA TTGGAACAAG TGACTGTAGA TCATGAAGTT
GGTCAAAGAG AAATTGACCG GGGAGTAGAA GCAAGCATCG CTTATGCCCG TCCAGATGCT
TACCAACTCA CCCAAGCTTT AGGCCCCCGT GACGAAACCG CCATTAATCC CGATGTAGAG
TTCTTTGATA TTAATGAAGA TAGCCTACTC GTTCTCGCTT CCGATGGCTT ATCTGATAAC
GATTTACTAG AAACTAATTG GCAAACTCAC CTACTGCCGT TATTGAGTTC TAGCACTAAT
TTAGAGCAGG GAGTAACAGA ATTAATCGAT TTGGCCAACC AATACAATGG TCATGACAAC
ATTACTGCTA TACTTGTCCG GGCAAAAGTG CGCCCAAATC TGGGGGAAGG GACGGGGGAT
TAA
 
Protein sequence
MLICPQCEFE NPNANKFCQK CGASLSHKVC PQCSTEVPVN AENCHNCGAE TGTVWRAIIE 
TGDWAAAVSV STLLSANPVD VASPKEDQTE LGFEEDGEEK IMLSPALFSV GSYLDKEQRY
QILQVLSAAH DEVSVRVLDC QPYQVSPIEA ILANQQQGLV TPAVEANGIP SLARAYMVLQ
SQNHTEIPRI HDAWEDGDNQ ILLIEDRTHY QPLLDLWQKE TTSSLEILHW FYQMTQLWVL
LEPLKCHYSL WDLANLCLDE DQTISLRKLY VKPPKSELAI DYLPLDFNPV TAQEEDVTLP
IFVQPSSIKA LGEVWQALFR ESQRTQFGSI IQILGDLQQG RIYSIAQLRS RLQEVATELE
ATTPPIFEPM EAEQTNAPTV LQADDTEDPS GKGDDMPTVV LSVQLSSLED AGRTDVGRQR
HHNEDYFGIE TKTEKLELPR NRILQARGLY ILCDGMGGHA GGEVASELAV ITLRQYFQQH
WTNNQLPTEE IIRESVYLAN EAIYEKNQQE ARSGVGRMGT TLVMLLVQGS QAAVAHVGDS
RLYRVTRKRG LEQVTVDHEV GQREIDRGVE ASIAYARPDA YQLTQALGPR DETAINPDVE
FFDINEDSLL VLASDGLSDN DLLETNWQTH LLPLLSSSTN LEQGVTELID LANQYNGHDN
ITAILVRAKV RPNLGEGTGD