| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0346 |
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| Symbol | |
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| ID | 3682779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 443655 |
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| End bp | 445874 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637715674 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_320867 |
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| Protein GI | 75906571 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.110262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.110805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCTT TATCTACCCC CAATCACTAC CATCAACGCG CAGAAAAATA TTTTTTTACA
GGTAATTATA TCCAAGCTGC AAGTCTCTAT GAAGAGGCAA TTTCCATAGA ACCTGATATT
AAATCCTACT ATTGGTATTT GGGATTAATT TTGCTCTTAC AGGGACAAGA AGTAGAAGCA
CAGACAACTT GGTTTATGGC CATGATGGAT GGAGAAGCAG AACAAGTTGA AGAATGGAAT
ACAGAATTAG TCACGATTTT AAAAACGGAA GCTGAACGCC AAGAAGAACG AGAAGAATAT
TCTGTTGCTG AGAAAATTCG CCGTAATATT AAGGAAATTT CTCCTCAAGA TATTCATAAC
CTCTTACATC TTGTTTTACT ATCTATCAAG TTAGAAATCT ATACTGGTAA TGATTTACAG
GAGTTGAAAG TAATTGATAT TCTCCAAGGA AACTCCACTG TAGAAGTAAG TTTAGACCTA
TTGACACAGC TTGTAAAAGC TACCTTAGAT TATGCTCCTG TACATCCCTC GACTCTAAAT
TTTCTAGAAA CTTGTTTGCC TTATTTTAAA AAAGATCCTA AAGATTTACT AATTATTTTA
ATGCCATCTG CCATAGAAAT TGCCTACTCT AAACGTCTGC CAGGCATAGC GGCTCAGATG
TGCGAGTTGT ACTTAAAATT AAGCCCTAAT AATACAGAAA TTATAGGTCA ATTATCTAGT
TTTTATCAGA ATTCAAATCA ATTTAAAAAG GGCATAGAAA CAGCAAGACT ATACTATTCT
TTAGTTGAGG AATTTGCTGA TAAAGTATTT GCAAATCGTC AGGTGCTACG CGGGTTAATT
AGTGCTGGGG GGCATTGGGA AGAATCTTGC TCCGTGAATA AAATACAGGA ATCATTAATA
GCATCTCTTA TAGAAAATCA ACCTACATAT CTTGATAACG TTAGAGTATC AAGACTATTT
AACGCCAATT TTTATAGTGC ATATCTTCAA GATAATCCTA GAAAAAATAG AAATATACAA
AATTGTTTAC TACAAGTTTG TCAGGCAAAT ATAGACAATT ATGCAAAAGA GCAAGTAGAA
AAATATATTT ATGGACATTT AGAAAGAAGA AAACAAGAAC GAACTAATAA TAAAATTAGA
ATTGGCTATC TATCATATTG TCTCAAAAGT CACTCTGTCG GCTGGCTAGC ACGGTGGCTT
TTTGAACATC ATGATAGAAG TAAATTTGAA ATTAATGCTT ATTTTATAAA TACAAATCCA
GACCTTGATC CCTTACATGA ATGGTATCTC AGCAAAGTAG ATAAAGCATA TAAATCAACA
AATACCAGTG AACTTGCGGA ACAAATTTAT CAAGATGAAA TTGATATTTT GATTGATTTA
GATAGCATTA CTCTTGATAT CAGTTGTGAA GTTATAGGGA TGAAACCTGC ACCAGTTCAA
GTAACTTGGT TGGGCTGGGA TGCTTCGGGG AGTCCATCTG TAGATTATTT TATTGCAGAT
CCCTACGTCT TACCAGAGTC AGCACAAGAA TATTATAAAG AAAAAATTTG GCGTTTACCT
CAAAGCTATA TAGCTGTAGA TGGGTTTGAA GTTAGTGTAC CTACAGTAAC TCGTGAAGAA
TTAGACATTC CTCATGATGC AGTTGTTTAT CTATGTGGAC AAAGAGGCTT TAAGCGACAT
CCAGATATTA CAAGACTGCA ATTGAAAATT ATTAAAGAAG TCCCCAACAG CTACTTTTTA
ATTAAAGGTA TCTCTGATGA AGACTCGATC AAATTATTCT TTGACGGGTT AGCAGATGAA
GAAGGCGTAG ATACATCGAG ACTGCGTTTT CTTCCCATTG TTATGTCAGA ATCAATTCAT
CGGGCTAATT TAGACATTGC CGATATAGTT TTAGATACCT ATCCCTACAA TGGAGCTACA
ACCACTTTAG AAACATTGTG GATGTGTATT CCTATGGTGA CGCGAGTAGG TGAGCAATTT
GCAGCGCGTA ACAGCTATAC CATGATGATG AATGCTGGTA TTACAGAAGG AATTGCTTGG
ACTGATGACG AATATATAGA GTGGGGTGTG CGTTTAGGTA AAGATGAAGC CTTAAGACAA
CAAATAGCTT GGAAGTTGAG ACAGTCAAGA AAAACATCAC CTCTATGGAA TGGTAAGCAA
TTTACCCGCG AAATGGAGAA GGCTTTTACT CAAATGTGGG AAATATATAC GAGTTCGTAG
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| Protein sequence | MISLSTPNHY HQRAEKYFFT GNYIQAASLY EEAISIEPDI KSYYWYLGLI LLLQGQEVEA
QTTWFMAMMD GEAEQVEEWN TELVTILKTE AERQEEREEY SVAEKIRRNI KEISPQDIHN
LLHLVLLSIK LEIYTGNDLQ ELKVIDILQG NSTVEVSLDL LTQLVKATLD YAPVHPSTLN
FLETCLPYFK KDPKDLLIIL MPSAIEIAYS KRLPGIAAQM CELYLKLSPN NTEIIGQLSS
FYQNSNQFKK GIETARLYYS LVEEFADKVF ANRQVLRGLI SAGGHWEESC SVNKIQESLI
ASLIENQPTY LDNVRVSRLF NANFYSAYLQ DNPRKNRNIQ NCLLQVCQAN IDNYAKEQVE
KYIYGHLERR KQERTNNKIR IGYLSYCLKS HSVGWLARWL FEHHDRSKFE INAYFINTNP
DLDPLHEWYL SKVDKAYKST NTSELAEQIY QDEIDILIDL DSITLDISCE VIGMKPAPVQ
VTWLGWDASG SPSVDYFIAD PYVLPESAQE YYKEKIWRLP QSYIAVDGFE VSVPTVTREE
LDIPHDAVVY LCGQRGFKRH PDITRLQLKI IKEVPNSYFL IKGISDEDSI KLFFDGLADE
EGVDTSRLRF LPIVMSESIH RANLDIADIV LDTYPYNGAT TTLETLWMCI PMVTRVGEQF
AARNSYTMMM NAGITEGIAW TDDEYIEWGV RLGKDEALRQ QIAWKLRQSR KTSPLWNGKQ
FTREMEKAFT QMWEIYTSS
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