Gene Ava_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0344 
Symbol 
ID3682777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp441503 
End bp442696 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content44% 
IMG OID637715672 
ProductMltA 
Protein accessionYP_320865 
Protein GI75906569 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.075779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0460048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAA CGCTGGCTTT GTTTTCCCTG AGTTTAGGAA TCACCTTTTT TAACCCACTG 
CAAATTGCTG TAAGTCAGGT ATCACCCACA GCACCACCTT TAAAACTTGT TGATATTGGT
ACTAACTGCA CTCCTCATCA TGCTTGCTTG GGTTGGGATG AGCAACTTTT TTCAGGACAT
AGGGGTTTAA AAAGCGATCG CCAAGGTCTA TTAAACTCAA TAGATAACAG TTTGCGTTAC
TTAGAAACTC CAAAAGCAGT TACAGCTTAC GATAACTACC CAATTAAAGA AATTACCCGC
GACAGAGTGC GTCGGAGTTT GCGGCGTTTT CGTCAGCTAG TGGCTACTGC TAAATCACCA
GCACAATTAC AAGCGGCGGT GCGGCGGGAG TTCGCTTTTT ACAAGTCGGT TGGTGATGAT
GGACAGGGTA CGGTCAAATT TACCGCCTAC TACGCACCAA TTTATCAAGC CAGTCGTGTA
CGCACTGCAC AATATAAATA TCCAATTTAT CGAGTACCAC CAGATTTTGA ACAATGGACT
AAACCCCACC CCAAACGGGT TGAATTAGAA GGGGTAGATG GTTTGTTGGG AGAAAAAAGC
CAGCTACGGG GTTTAGAGAT GTTTTGGTTA CGCGATCGCT TTCAAGCATA CATGATCCAT
ATCCAAGGTT CTGCTAAACT CAACCTAACT GATGGGACTC AAACTAGTGT CGGTTTTGTA
CGCGGAACGG ATTACCCTTG GACAAGTATC GGGCGGCTGC TGTTTCAAGA TGGCAAACTA
ACTAAAGAAG AATTAAATAT GCCGGGAATT ATTCGCTATT TCCGCAAAAG TCCCCAGTCT
ATGAGTAATT ATTTACCACG TTGGGAACGC TTCATTTTCT TTAAGGAAAC TAAAGGTGAA
CCAGCTACAG GCAGTATCAG CGTGCCTCTT GTACCAGAAC GTTCTATTGC CACAGATAAA
TCTCTCATGC CACCAGGAGC ATTGGCTGTA ATGAACGCAA CATTTCCTTA TCCCGGACAG
CGTAATCAAT TAATTCAGCG CAGAGTCAGC CGTTTTGTCC TGGATCAAGA TACAGGTAGC
GCCATTAAAG GCCCTGGCAG AGTAGATTAT TTCCTTGGCT ATGGTGACTT AGCAGGCGAT
CGCGCTGGCA TTACCGTTAC TACTGGTTCT ATCTATTACC TACTACTAAA GTAA
 
Protein sequence
MRKTLALFSL SLGITFFNPL QIAVSQVSPT APPLKLVDIG TNCTPHHACL GWDEQLFSGH 
RGLKSDRQGL LNSIDNSLRY LETPKAVTAY DNYPIKEITR DRVRRSLRRF RQLVATAKSP
AQLQAAVRRE FAFYKSVGDD GQGTVKFTAY YAPIYQASRV RTAQYKYPIY RVPPDFEQWT
KPHPKRVELE GVDGLLGEKS QLRGLEMFWL RDRFQAYMIH IQGSAKLNLT DGTQTSVGFV
RGTDYPWTSI GRLLFQDGKL TKEELNMPGI IRYFRKSPQS MSNYLPRWER FIFFKETKGE
PATGSISVPL VPERSIATDK SLMPPGALAV MNATFPYPGQ RNQLIQRRVS RFVLDQDTGS
AIKGPGRVDY FLGYGDLAGD RAGITVTTGS IYYLLLK