Gene Ava_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0331 
Symbol 
ID3682764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp429386 
End bp429883 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content45% 
IMG OID637715659 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_320852 
Protein GI75906556 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.592702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.303367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTTT GTGTTGTGGT TTTGGTGTTG GCACAAGTAG GGAATAAACA GGACTCTGCT 
ATTGCTGCTA ATTTACCGCA AACTCCACTA GCCACCATTA GCGTTACTGA AAACAATACT
CCAATCAAGA GCAATATTAT GTCTGATGCC TCTAAGCCGA CTGTCACTAC CGATTCTGGT
CTCAAATATG TGGAAATAGA AGAGGGAACT GGCGCGACTC CCAAAAGTGG ACAAACCGTC
GTAGTTCACT ACACTGGTAC TTTAGAAGAT GGTACCAAGT TTGATAGCTC ACGCGATCGC
AATCGTCCCT TCAGCTTTAC CATCGGTGTT GGACAAGTCA TTAAAGGTTG GGATGAAGGA
CTTAGCACCA TGAAAGTAGG TGGTCGTCGT CAATTAATCA TCCCCTCAGA ATTGGGTTAT
GGCGCTCGTG GTGCTGGTGG GGTGATTCCA CCTTACTCAA CCCTACTATT TGATGTGGAA
TTGTTGGAAG TGAAGTAG
 
Protein sequence
MLVCVVVLVL AQVGNKQDSA IAANLPQTPL ATISVTENNT PIKSNIMSDA SKPTVTTDSG 
LKYVEIEEGT GATPKSGQTV VVHYTGTLED GTKFDSSRDR NRPFSFTIGV GQVIKGWDEG
LSTMKVGGRR QLIIPSELGY GARGAGGVIP PYSTLLFDVE LLEVK