Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0330 |
Symbol | |
ID | 3682763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 427954 |
End bp | 429306 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637715658 |
Product | DnaB helicase |
Protein accession | YP_320851 |
Protein GI | 75906555 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.850269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.345432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAG AATTGAGCTT TCAAGGCGAC GGTAGTAACC GCCTTCCACC CCAAAACATC GAGGCAGAAG AAGCAATTTT AGGGGGCATT CTACTAGATC CAGAAGCGAT TGGTCGAGTA AGCGAAGTCC TGATTACCGA AGCTTTTTAT ATTAGCGCCC ACAGGGATAT CTATCAAGCC GCATTGCGTC TCCACGGCCA AGGTAAACCC ACAGATTTGC TGTCAGTCAC AAGTTGGCTC ACTGATAATG ACTTACTGAC CCGCATAGGT GGTAGAAACA AATTAGCCAC CTTGGTAGAC CGCACAGTCT CAGCTGTGAA TATCGATGCC TTAGCAGGGT TAGTGATGGA AAAATACCTG CGACGGCAAT TAATTAAAGC TGGCAATGAA ATTGTCCATC TCGGTTACGA GACAGAAAAA GAATTACCCA TAGTACTAGA CCAAGCAGAA CAGAAAGTTT TTGGCGTTAC TCAAGAACGA CCCCAATCAG GCTTAGTTCA CATCGCAGAC ACCCTAATTA ATAACTTCCA AGAAATTGAG GAGCGCAATC AAGGCATTGC TTTACCTGGT ATTCCCTGCG GCTTTTATGA TTTAGATGCG ATGACTAGTG GCTTTCAGCG TTCTGATTTA ATCATCGTCG CTGGCAGGCC ATCAATGGGG AAAACAGCAT TTTGTTTGAA CCTAGCTAAT AATATCGCTG CTTCCATGAA GCTACCTGTT GCTGTTTTCA GTTTAGAAAT GTCGAAAGAG CAGCTGGTAC AACGTCTACT GGCTAGTGAA GCCCAAATCG AAAGTGGCTA TCTGCGGAGT GGTCGCCTCA GTCAAACACA ATGGGAACCA TTAAGCCGGG CGATTAGTAT GCTGTCTGAA ATGCCCATTT TTATTGATGA CACGCCGAAT ATTACCGTCA CCCAAATGCG CTCTCAAGCT AGAAGATTAC AAGCCGAACA AGGTGTAGAA CTGGGTTTGA TAGTGATAGA TTACCTGCAA TTAATGGAAG GAGGCGGAGA TAATCGCGTC CAAGAGTTAT CTAAAATTAC CCGTTCTCTC AAAGGTTTAG CTAGAGAATT ATCCGTACCT GTAATAGCTC TGTCTCAGCT AAGTCGTGGC GTAGAAGCAC GCACCAACAA GCGTCCTATG TTGTCTGATT TACGTGAAAG CGGCTCCATT GAGCAGGATG CGGATTTAGT TATTATGTTA TACCGTGATG ATTACTATAA CAGCGACACC CCCGATCGCG GCCTAGCGGA AGTAATTATA GCGAAACATC GCAACGGCCC AACAGGTACA GTAAAACTCC TATTTGACCC ACAGTTTACC AAATTTAAAA ACTTAGCCAG ATCGGGCTAT TAA
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Protein sequence | MAEELSFQGD GSNRLPPQNI EAEEAILGGI LLDPEAIGRV SEVLITEAFY ISAHRDIYQA ALRLHGQGKP TDLLSVTSWL TDNDLLTRIG GRNKLATLVD RTVSAVNIDA LAGLVMEKYL RRQLIKAGNE IVHLGYETEK ELPIVLDQAE QKVFGVTQER PQSGLVHIAD TLINNFQEIE ERNQGIALPG IPCGFYDLDA MTSGFQRSDL IIVAGRPSMG KTAFCLNLAN NIAASMKLPV AVFSLEMSKE QLVQRLLASE AQIESGYLRS GRLSQTQWEP LSRAISMLSE MPIFIDDTPN ITVTQMRSQA RRLQAEQGVE LGLIVIDYLQ LMEGGGDNRV QELSKITRSL KGLARELSVP VIALSQLSRG VEARTNKRPM LSDLRESGSI EQDADLVIML YRDDYYNSDT PDRGLAEVII AKHRNGPTGT VKLLFDPQFT KFKNLARSGY
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