Gene Ava_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0324 
Symbol 
ID3682796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp420792 
End bp421994 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content38% 
IMG OID637715652 
Productglycosyl transferase, group 1 
Protein accessionYP_320845 
Protein GI75906549 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.546563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.700296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA AATATATTTT CTATAGTAGA ATAATCTCCC AGAAACCAGA TACGGCTCAC 
GAAATTCATG ACGTTCTTTG TGCTAATGGC GCAGCTAATT TAGGATATTC CTCTGTTTTA
GTATATCCAG AAGCTAGTCG AGGTTCTGGG AATACATTAG ATTTACTTAA TCCTTTCCAA
CCAAAACAGC CAGATCAAAG TTTTGTAGAT TTTTACGATG TGCAAGATAA GCTAAAAGTG
GCATCTTTAC CAATGCCCTG GCCGATTGAT TGTGTAGGGG GTAAATTTAC AGCATCTAGT
ACAGTGGTAA CGCGATATTA TTTACCATTT CATCTCCTAA AATATACAAA AATCGTTCAC
ACTAGAGACT GGAACTTTGT CCAAGCAGCA ATAAAAAACC GCATTCCCAC TATCTACGAA
CGCCACTACT TCCAAAAGGA AAAAGTTCCC AAAGCCATTG CTGAAAGTCC ATTTCTACAA
GTTGCTGTCA CCCAATCAGA AATTATTAGA CAAAGTTTAA TTGAACAGGG ATTTCCCCCA
GAGAAAGTTG TTTGGGTACA TAACGGATTT GATCAATCAT TCTTATTAAG ACAATCGGAG
CAAGCCACAG CATGGCGCAA AGAATTACTC AAAGATGAAC ATCAGTCTCT AGTGGTTTAT
TCTGGCGCTT TATACCCTTT TAAAGGTATT GATGTTTTAA TTGATGCAGC CAAAGAATTA
CCACAAGTTC AGTTTGCTAT TACAGGCGGT AAGACAGAAC AAGTGACAGC TTATCAACAA
TTGGCTAAAG ATAAACAAGT AGAAAATGTC AAGTTTCTAG GTTGGATATT GCCTCGCCAA
CGCTTAGTCA GTTTATTTCA AGCTGCTGAT ATTTTGGTTC ATCCCCACTG CTCTGGCAAG
TCTGCTAATT TCACGAATCC TGTGAAATTC TTCCAATACA TGGCTTCTGG AACTCCCATA
GTAATTACAG AAATTCCTCC GTTAATGCTT TTTAAAGATA TGCCTTTAGC TGCTGTGTGG
TGTGAACCTG ATAATCCTTA CCAACTGGCT AAAGCACTGA AACAAGCATT AGAAATTTAT
CCAAGAAAAA TAGAAGGTTA TACAAATAAT ATTGCATTAG CTAAACCATT TTCCTGGGAA
AATAGAGCCG AAAAAATCCT CAGTTACGTT GATGAATCTT TGCGTCCCCC ACTCATAGCT
TAA
 
Protein sequence
MKNKYIFYSR IISQKPDTAH EIHDVLCANG AANLGYSSVL VYPEASRGSG NTLDLLNPFQ 
PKQPDQSFVD FYDVQDKLKV ASLPMPWPID CVGGKFTASS TVVTRYYLPF HLLKYTKIVH
TRDWNFVQAA IKNRIPTIYE RHYFQKEKVP KAIAESPFLQ VAVTQSEIIR QSLIEQGFPP
EKVVWVHNGF DQSFLLRQSE QATAWRKELL KDEHQSLVVY SGALYPFKGI DVLIDAAKEL
PQVQFAITGG KTEQVTAYQQ LAKDKQVENV KFLGWILPRQ RLVSLFQAAD ILVHPHCSGK
SANFTNPVKF FQYMASGTPI VITEIPPLML FKDMPLAAVW CEPDNPYQLA KALKQALEIY
PRKIEGYTNN IALAKPFSWE NRAEKILSYV DESLRPPLIA