Gene Ava_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0309 
Symbol 
ID3682781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp396919 
End bp398346 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content44% 
IMG OID637715637 
Producthypothetical protein 
Protein accessionYP_320830 
Protein GI75906534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTA CTAGTCAGGG CGTTCCAGGT TTGCCCGATT TGACCCATCC AACAGAGCTA 
ATTCAGCTTG GGTCGCAATT AATTACAGCT TCTCTATTAT TAGTATTTTT AGTCATAGCT
TTGGGAGTTG CGATCGCTCT GATGAGTTTC GCTTTGCGAC ACAATTCGTC ACAACAAACT
ATTTTTATTG GTGAATGGGC TATTCGCTAT GCCCAAATCT TGCGGGGATT GCAACACTTA
ACCTTAGTAT TAATCTTATT GGTGGGAGGA TTTTTTCTCT CTGCGACCTT AAGTAATCGT
TATCACCACT GGGAACAGGC AAAAATTGCC CAAGTAGTCC AAAGCGTTTC TGGGGATAAA
TTAGAACAAA TTGCGCCGCA AGTGCGCTAT GTCACCCAAG AACCATATAC TTACACAACT
CAAGTTAATG GCAAAATAGT CAAGGTCAAT GATACGCAAC AGGTAAGCCG CTTACTATCC
TTGGCAGGCT CGCAAATTCA GGTAAAGTTG GAACAAAGTA CCGATGTACA AGGACGTAGT
GCGGTTTATC GTGCAGACTA CACTGCTGAT TACAAAGTAG TCAACCGCCT CAAGGATATT
AATAATTTCT TCTTTGAAAT ACAGCCGCCC AATGGCTACT CATTACTATC TAACTATAAA
GTAGAGCGCG ATGGGCTACG CCCCGCCGGA GGCGATCGCA CCAGGTTAGA ACCGGTCAAT
CCAGGGAATT ATAGCTTTGC CTTTCGTTTG GAACCAGGAC AAGAAACCAG TTTTCGCGTT
ACTTATCAGG CGCAAGGAGG GCCGCGCTGG GTTTACAATA GCGCCGGACA ACTATTATCT
AATTTTCGCC TGACAACGAT AGCCACCTTT GCTGGGGCTG ATTTTGCTAG TGGGATTGTG
CCTAAGGATA GAAAAGCTGA TGGACGCAGT ACCCAATATA CTTGGATATT TGATGATAAT
GTTTCTGTGA AAAACCCATT TGGGGTATTC ACCAATACAA ACCCCATCCG CCAAACAGGC
ATTATTCCCC GTTTATTGTT ATTAGCACCA GCATTATTTT TGTGGTGGAT CTTATTGCTA
TATTTATCCC TACCGATAAG TTTAACAAAC GTAGCGATCG CCAGTAGTAT CTACTTTGCT
TGTTTGTTGA CCTTAACCTA CTTGAGCCGC TTTATGGATG CTCAATTAGC ATGGACGATG
ATTTCCCTTG TCCTACTTAC CTTAACTTGG GGCTTGGGTT CTACTCGTAG TGCTGCTTTG
GCTGCCATCA TTTGTACCAT CGCTGGGGCA ATAGTACCAG TCTTGGGATT ATTAGTACCA
TACAGTGGTC TGACCTTGAG CGTTGCAGGT TTACTGTCTG TGATTTGGTT GGCGGTTCGT
CACTGGTATA ACTGGGATAT CTCGCAACCA GAGGATAGTA AAAGTTAA
 
Protein sequence
MSSTSQGVPG LPDLTHPTEL IQLGSQLITA SLLLVFLVIA LGVAIALMSF ALRHNSSQQT 
IFIGEWAIRY AQILRGLQHL TLVLILLVGG FFLSATLSNR YHHWEQAKIA QVVQSVSGDK
LEQIAPQVRY VTQEPYTYTT QVNGKIVKVN DTQQVSRLLS LAGSQIQVKL EQSTDVQGRS
AVYRADYTAD YKVVNRLKDI NNFFFEIQPP NGYSLLSNYK VERDGLRPAG GDRTRLEPVN
PGNYSFAFRL EPGQETSFRV TYQAQGGPRW VYNSAGQLLS NFRLTTIATF AGADFASGIV
PKDRKADGRS TQYTWIFDDN VSVKNPFGVF TNTNPIRQTG IIPRLLLLAP ALFLWWILLL
YLSLPISLTN VAIASSIYFA CLLTLTYLSR FMDAQLAWTM ISLVLLTLTW GLGSTRSAAL
AAIICTIAGA IVPVLGLLVP YSGLTLSVAG LLSVIWLAVR HWYNWDISQP EDSKS