Gene Ava_0295 details

Gene Information

• Locus tag: Ava_0295
• Symbol: dnaK
• ID: 3682884
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_007413
• Strand: -
• Start bp: 374538
• End bp: 376439
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637715623
• Product: molecular chaperone DnaK
• Protein accession: YP_320816
• Protein GI: 75906520
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAAAAG TAGTTGGAAT TGACTTAGGA ACAACTAACT CCTGCGTCGC AGTAATGGAA 
GGTGGTAAAC CCACAGTTAT TGCCAACGCA GAAGGTTTCC GCACCACACC GTCGGTAGTG 
GCATTTGCTA AAAACGGCGA CACCCTAGTA GGACAAATCG CCAAGCGCCA AGCGGTGATG 
AACCCCGAAA ATACTTTCTA TTCTGTTAAG CGCTTTATTG GTCGTCGCTA CGACGAAGTA 
ACAAACGAAG CTACAGAAGT TTCCTACAAA GTTCTCAGCA GTGGCGGTAA CGTCAAGGTA 
GACTCTCCTG GAGCCGGTAA ACAATTTGCT CCCGAAGAAA TTTCTGCCAA GGTTCTCCGC 
AAACTAGTGG AAGATGCTAG TAAATACCTT GGTGAAACTG TTACCCAAGC TGTAATCACC 
GTTCCCGCAT ACTTCAATGA CTCCCAACGT CAAGCGACCA AAGACGCTGG TAAGATTGCT 
GGTATTGAAG TCATGCGGAT TATCAACGAA CCTACAGCTG CTTCCTTGGC TTACGGTTTT 
GATAAAAAGA GCAATGAAAC CATCCTCGTA TTTGACCTTG GTGGTGGTAC ATTCGACGTA 
TCCGTCCTAG AAGTAGGCGA CGGCGTATTT GAAGTATTGG CTACTTCTGG TGATACCCAC 
CTTGGTGGTG ACGACTTCGA TAAAAAAATC GTTGATTTCC TCGCTGAACA GTTCAGAAAA 
GACGAAGGTA TTGACCTCCG CAAAGACAAA CAAGCACTGC AACGCTTAAC CGAAGCAGCA 
GAGAAAGCTA AGATTGAGCT TTCCAGCGTT ACCCAAGCAG AAATTAACCT CCCATTCATC 
ACCGCTACCC AGGACGGCCC CAAACACCTG GATATGACCC TGACTCGCGC TAAGTTTGAA 
GAACTTTGTG CCGACTTGAT TGACCGTTGC CGTATTCCCG TCGAACAGGC GCTACGGGAT 
GCCAAACTCA AGAAAGACAA TATTGATGAA GTGGTCTTAG TGGGTGGTTC TACCCGTATC 
CCTGCGGTAC AACAACTCGT TAAGAATCTG CTAGGTAAAG AACCAAACCA AACTGTTAAC 
CCTGATGAAG TTGTGGCAGT TGGCGCAGCA ATTCAAGCAG GTGTATTGGG TGGTGAAGTC 
ACGGGCATCT TATTGTTAGA TGTAACACCA TTGTCCTTGG GTGTAGAAAC CTTGGGTGGT 
GTGATGACAA AGATTATTCC TCGTAACACC ACAATTCCCA CCAAGAAATC TGAAGTCTTC 
TCTACAGCCG TGGATGGTCA AACCAACGTG GAAATTCACG TCCTCCAAGG TGAACGAGAA 
TTTGCCAACG ATAACAAGAG CTTGGGAACC TTCCGCCTCG ATGGTATTCC TCCAGCACCA 
CGGGGTGTTC CCCAAATCGA AGTCGTGTTC GACATTGATG CTAACGGTAT CCTGAACGTC 
ACCGCTAAAG ATAAAGGTAC TGGTAAGGAA CAGTCCATCA GTATTACTGG TGCTTCCACT 
CTGGATAAAA CTGACATTGA CCGCATGGTG AGAGAAGCGG AACAAAACGC TTCATCTGAC 
AAAGAACGCC GGGAGAAAAT TGAGCGCAAA AACCAAGCCG ATTCTTTGGC ATACCAAGCT 
GAGAAGCAGC TACAAGAATT GGGTGATAAA GTCCCCGAAG CAGATAAAAC CAAAGTTGAA 
GGTTTAGTGA AAGACCTGCG GGAAGCCGTT GCTAAGGAAG ACGACGAGCA AATCAAAAAG 
CTGACCCCAG AATTGCAACA AGCATTGTTC GCAGTTGGTA GCAATATCTA TCAACAAGCT 
GGTGGCGGTG CTGCGCCTGG TGCGGCTCCT CAAGATGGCG GTACTACTTC ATCTGATGGT 
GGTGATGATG TAATTGACGC TGATTTTACA GAGACTAAAT AA 

 

Protein sequence

MAKVVGIDLG TTNSCVAVME GGKPTVIANA EGFRTTPSVV AFAKNGDTLV GQIAKRQAVM 
NPENTFYSVK RFIGRRYDEV TNEATEVSYK VLSSGGNVKV DSPGAGKQFA PEEISAKVLR 
KLVEDASKYL GETVTQAVIT VPAYFNDSQR QATKDAGKIA GIEVMRIINE PTAASLAYGF 
DKKSNETILV FDLGGGTFDV SVLEVGDGVF EVLATSGDTH LGGDDFDKKI VDFLAEQFRK 
DEGIDLRKDK QALQRLTEAA EKAKIELSSV TQAEINLPFI TATQDGPKHL DMTLTRAKFE 
ELCADLIDRC RIPVEQALRD AKLKKDNIDE VVLVGGSTRI PAVQQLVKNL LGKEPNQTVN 
PDEVVAVGAA IQAGVLGGEV TGILLLDVTP LSLGVETLGG VMTKIIPRNT TIPTKKSEVF 
STAVDGQTNV EIHVLQGERE FANDNKSLGT FRLDGIPPAP RGVPQIEVVF DIDANGILNV 
TAKDKGTGKE QSISITGAST LDKTDIDRMV REAEQNASSD KERREKIERK NQADSLAYQA 
EKQLQELGDK VPEADKTKVE GLVKDLREAV AKEDDEQIKK LTPELQQALF AVGSNIYQQA 
GGGAAPGAAP QDGGTTSSDG GDDVIDADFT ETK