Gene Ava_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0294 
Symbol 
ID3682883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp373266 
End bp374255 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content46% 
IMG OID637715622 
Productprotochlorophyllide oxidoreductase 
Protein accessionYP_320815 
Protein GI75906519 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01289] light-dependent protochlorophyllide reductase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.920312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGG ATCGAAAATC AACAGTTATA GTCACTGGAG CTTCTTCTGG GGTTGGTTTG 
TACGCTGCAA AAGCCCTTGC TAAAAGAGGA TGGCACGTCG TCATGGCTTG CCGCAATTTA
GAGAAAGCAG AACAAGCCGC GCAAGAAGTC GGAATCCCCA AGGATAGCTA CACCATCATA
CATATTGACT TAGGCTCATT GGATAGTGTG CGCCAGTTTG TGAATGACTT TAGAGCTACT
GGCAAATCCT TAGACGCTCT ATTGTGCAAT GCTGCCATTT ATATGCCCTT AATCAAAGAG
CCTTTACGCA GCCCAGAAGG TTACGAATTG ACTATGACCA CCAATCACCT TGGTCATTTT
TTGCTGTGTA AGCTCATGCT GGAAGATTTG CAGAAGTCAT CGGCTGCGGA TAAACGACTT
GTGATTTTAG GAACTGTCAC CCACAACCCA GACGAACTAG GTGGTAAAAT TCCCCCGCGC
CCAGACTTGG GTAATTTGGA AGGGTTTGCC CAAGGCTTTA AACCACCAAT TTCTATGATT
GACGGTAAGA AGTTTGAACC AGTGAAGGCT TACAAAGACA GCAAAGTTTG TAACGTCCTA
ACCATGCGGG AACTGCATCG CCGTTATCAC GAATCCACCG GCATTACTTT CACTTCCCTT
TATCCCGGTT GCGTCGCCGA AACACCACTA TTCCGCAACC ACTATCCCCT ATTCCAGAAA
ATCTTCCCCT TGTTCCAAAA GTACATCACT GGCGGATACG TATCCCAAGA GTTGGCAGGA
GAGAGGGTTG CAGATGTGAT TGCTGCGCCT GAATACAAAC AATCTGGTGC TTATTGGAGT
TGGGGAAATC GTCAAAAGAA AGATGGTAAG TCTTTTGTAC AAAAAGTTTC TCCCCAAGCT
CGTGATGATG AAAAAGCCGA ACGCCTGTGG GATTTGAGCG AAAAGCTAGT TGGACTGGAG
TCACAAAAGC CAGTTGCACT CAATAGTTAG
 
Protein sequence
MAQDRKSTVI VTGASSGVGL YAAKALAKRG WHVVMACRNL EKAEQAAQEV GIPKDSYTII 
HIDLGSLDSV RQFVNDFRAT GKSLDALLCN AAIYMPLIKE PLRSPEGYEL TMTTNHLGHF
LLCKLMLEDL QKSSAADKRL VILGTVTHNP DELGGKIPPR PDLGNLEGFA QGFKPPISMI
DGKKFEPVKA YKDSKVCNVL TMRELHRRYH ESTGITFTSL YPGCVAETPL FRNHYPLFQK
IFPLFQKYIT GGYVSQELAG ERVADVIAAP EYKQSGAYWS WGNRQKKDGK SFVQKVSPQA
RDDEKAERLW DLSEKLVGLE SQKPVALNS