Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0294 |
Symbol | |
ID | 3682883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 373266 |
End bp | 374255 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637715622 |
Product | protochlorophyllide oxidoreductase |
Protein accession | YP_320815 |
Protein GI | 75906519 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01289] light-dependent protochlorophyllide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.920312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAGG ATCGAAAATC AACAGTTATA GTCACTGGAG CTTCTTCTGG GGTTGGTTTG TACGCTGCAA AAGCCCTTGC TAAAAGAGGA TGGCACGTCG TCATGGCTTG CCGCAATTTA GAGAAAGCAG AACAAGCCGC GCAAGAAGTC GGAATCCCCA AGGATAGCTA CACCATCATA CATATTGACT TAGGCTCATT GGATAGTGTG CGCCAGTTTG TGAATGACTT TAGAGCTACT GGCAAATCCT TAGACGCTCT ATTGTGCAAT GCTGCCATTT ATATGCCCTT AATCAAAGAG CCTTTACGCA GCCCAGAAGG TTACGAATTG ACTATGACCA CCAATCACCT TGGTCATTTT TTGCTGTGTA AGCTCATGCT GGAAGATTTG CAGAAGTCAT CGGCTGCGGA TAAACGACTT GTGATTTTAG GAACTGTCAC CCACAACCCA GACGAACTAG GTGGTAAAAT TCCCCCGCGC CCAGACTTGG GTAATTTGGA AGGGTTTGCC CAAGGCTTTA AACCACCAAT TTCTATGATT GACGGTAAGA AGTTTGAACC AGTGAAGGCT TACAAAGACA GCAAAGTTTG TAACGTCCTA ACCATGCGGG AACTGCATCG CCGTTATCAC GAATCCACCG GCATTACTTT CACTTCCCTT TATCCCGGTT GCGTCGCCGA AACACCACTA TTCCGCAACC ACTATCCCCT ATTCCAGAAA ATCTTCCCCT TGTTCCAAAA GTACATCACT GGCGGATACG TATCCCAAGA GTTGGCAGGA GAGAGGGTTG CAGATGTGAT TGCTGCGCCT GAATACAAAC AATCTGGTGC TTATTGGAGT TGGGGAAATC GTCAAAAGAA AGATGGTAAG TCTTTTGTAC AAAAAGTTTC TCCCCAAGCT CGTGATGATG AAAAAGCCGA ACGCCTGTGG GATTTGAGCG AAAAGCTAGT TGGACTGGAG TCACAAAAGC CAGTTGCACT CAATAGTTAG
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Protein sequence | MAQDRKSTVI VTGASSGVGL YAAKALAKRG WHVVMACRNL EKAEQAAQEV GIPKDSYTII HIDLGSLDSV RQFVNDFRAT GKSLDALLCN AAIYMPLIKE PLRSPEGYEL TMTTNHLGHF LLCKLMLEDL QKSSAADKRL VILGTVTHNP DELGGKIPPR PDLGNLEGFA QGFKPPISMI DGKKFEPVKA YKDSKVCNVL TMRELHRRYH ESTGITFTSL YPGCVAETPL FRNHYPLFQK IFPLFQKYIT GGYVSQELAG ERVADVIAAP EYKQSGAYWS WGNRQKKDGK SFVQKVSPQA RDDEKAERLW DLSEKLVGLE SQKPVALNS
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