Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0290 |
Symbol | |
ID | 3682879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 367948 |
End bp | 368496 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637715618 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_320811 |
Protein GI | 75906515 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.560216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCTA ATAAACTCCT AGAGTTATAT AACGCAGGAG AACGAAAATT CCACAGAGCA AATCTGCATC AAGCTAACCT TTATGCTGTT GATTTGAGGG GGGCAAATTT TGCCGAAGCT GATTTAAGTG GAGCCAACCT TAGTCAAGCT AACTTGAGTG GATGTAATCT CAGTCGTGCT AATTTAACTG ATGCAGACTT GAGTGGAGCT AACTTGAGTG GAGCTAACTT GAGTGAAGTC AACTTCATCG GTGCAGATTT AATTAGCACC AATTTAAAAC AAAGCAATCT CAGTCGAGCA GATTTACGCG GTGCCAATTT AATTTTGGCC AATTTATTCA GTGCTAACCT GAGTGAAGCG GAAATGAGTG GTGCTGATTT GAGTGGCGCT AATCTCAAGC AAGCAAACTT AATTGGTAGC AACGTCATGG AAGCAGAATT GAAGGGGGCA AATTTCTCTG GAGCTGTCAT TACAGAGCAA GAAATCACTG GTAGAGTTTT GCGCTTAGGT CTCTCTCACA GATGGATAAC TTGGGCTGGT TGTCATTGA
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Protein sequence | MDANKLLELY NAGERKFHRA NLHQANLYAV DLRGANFAEA DLSGANLSQA NLSGCNLSRA NLTDADLSGA NLSGANLSEV NFIGADLIST NLKQSNLSRA DLRGANLILA NLFSANLSEA EMSGADLSGA NLKQANLIGS NVMEAELKGA NFSGAVITEQ EITGRVLRLG LSHRWITWAG CH
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