Gene Ava_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0274 
Symbol 
ID3682902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp351037 
End bp351933 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content43% 
IMG OID637715602 
Productglycosyl transferase family protein 
Protein accessionYP_320795 
Protein GI75906499 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCTA TTTACATTCT GACTTATAAC GAAGAACTAG ATATTGCAGG TTGTATAGAA 
TCAGCGATGT TATCGGATGA CATCATCGTT GTAGATTCAT GTAGTAGCGA TCGCACTGTA
GAAATCGCCA ATCGTTATCC CATTCGTGTT GTGCAGCACG CCTTTGAAAG CCACGGTCGC
CAACGAACCT GGATGCTAGA GTCTCTCCCA CCGAAACACC AATGGGTATA TATTCTCGAA
GCTGATGAGC GGATGACACC GGAGTTATTT GCCGAGTGTG AACAAGCAAT TACAACTTCC
AAATACATTG GTTACTACGT TGCTGAACGG GTGATGTTCA TGAACCGATG GATTCGCTAC
AGCACTCAAT ATCCCCGTTA TCAGATGCGT TTGTTCCGAC ATGGTAAAGT TTGGTTTACC
GACTACGGAC ATACAGAACG AGAAGTTTGT GAAGGTGCTA CCAGCTTTCT TAAAGAGACC
TATCCTCACT ACACTTGCAG CAAGGGTTTG AGCCGTTGGA TTGAAAAACA TAACCGTTAT
TCTACGGATG AAGCGAAAGA GACTTTATAT CAATTAGAAA ATGGCAAGGT TGACTGGCGA
GATTTATTGT TTGGTAAATC GGAAGTTGCT AGGCGGCGTG CGTTAAAAGA CTTATCTCTA
CGACTACCAG CCAGACCTTT GTTACGTTTT CTATATATGT ACTTTCTTTT AGGCGGTTGT
CTAGATGGAC GTGCAGGAAT GGCTTGGTGT ACATTACAAG CTTTTTATGA ATACCTAATT
TTGTTGAAAG CCTGGGAAAT GAAATATCTA CCCATCCCTA GTTTAGAACC AGAGATAGTT
TCTAGCAGCG ACAGCAAACA GGAAGCCGCA AGAGAGGAAC TAGGGTCGAG GGATTAA
 
Protein sequence
MFSIYILTYN EELDIAGCIE SAMLSDDIIV VDSCSSDRTV EIANRYPIRV VQHAFESHGR 
QRTWMLESLP PKHQWVYILE ADERMTPELF AECEQAITTS KYIGYYVAER VMFMNRWIRY
STQYPRYQMR LFRHGKVWFT DYGHTEREVC EGATSFLKET YPHYTCSKGL SRWIEKHNRY
STDEAKETLY QLENGKVDWR DLLFGKSEVA RRRALKDLSL RLPARPLLRF LYMYFLLGGC
LDGRAGMAWC TLQAFYEYLI LLKAWEMKYL PIPSLEPEIV SSSDSKQEAA REELGSRD