Gene Ava_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0269 
Symbol 
ID3682956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp346535 
End bp347542 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content35% 
IMG OID637715597 
Productglycosyl transferase family protein 
Protein accessionYP_320790 
Protein GI75906494 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAA AACCACAAAA TTTCCGAGAA CAACTAGACT TTACTGTTGC CATCCCCACA 
TGGAATGGTG CAGAACGTTT ACCACAAGTG TTAGATAGAC TATTGACTCA AAATGGTATA
GAGCATTTAC ATTGGGAAGT TATTATTATC GATAATAATA GCAGCGATCG CACACCTGAA
GTAGTGAGTG ATTACCAGAA AAAATTTACT CAATGTCAGT TGAAATATTT TCTGGAAACA
CAACAGGGAT TAGCCTATGG AAGACTCAGA GCAATCAAGG AAGCTCAAGG TAAATTCATC
GCTTTTTTAG ATGATGACAA CTTAGCAGCA TCCGATTGGA TTTTACAATC TTATAATTTT
GGTGAAGAAC ATCCTCAAGC AGGTGCATGG AGTGGCCAAA TACATGGTGA TTTTGAAGTA
AAACCGCCAG AGGATTTTCC GCAAATCCAG TCTTTTTTAG CAGTTCGGGA ACATGGAAAA
AAAGCATATA AATTTGATGC TAAAAATCTA AAGCTACCAC CAGGAGCTGC ACTTGTTATT
CGTAAACAAG CCTGGCTGGA AAGCGTACCC CAACAGTTAG TTTTTAAGGG AAGAATTGGG
AATTTAATGG TTTCTGGGGA GGATACAGAA GTTCTCCTAT ATATATACAA ATCTGGTTGG
GAAATTTGGT ACAACCCAAA AATGGAAATT TATCATAAAA TTCCCCACTG GCGACTTGAA
AAGAATTACT TAATAAATAT AGCTCGTGGT TGTGGGTTAT GTATTTTTCA ACTCAGATTA
ATAAATGCTA AACAAGGGCA ATCACCAATG ATTTTACTCA GAACAATTTT AGGCAATACA
CGCAGGTTAT TTTGGCATAT CATTAAGTAT AATAAGAATT TAAATAGAAA TACAGTGGCA
ATTGTTGAAT TTAATTTTTA TTTAGGTAGT CTTTTGAGTC CTCTATATTC ACTAATATTT
TATTGTCAAA AAATAGCAAA TAAAGACATG AGTTTCAATC ATGACTGA
 
Protein sequence
MTQKPQNFRE QLDFTVAIPT WNGAERLPQV LDRLLTQNGI EHLHWEVIII DNNSSDRTPE 
VVSDYQKKFT QCQLKYFLET QQGLAYGRLR AIKEAQGKFI AFLDDDNLAA SDWILQSYNF
GEEHPQAGAW SGQIHGDFEV KPPEDFPQIQ SFLAVREHGK KAYKFDAKNL KLPPGAALVI
RKQAWLESVP QQLVFKGRIG NLMVSGEDTE VLLYIYKSGW EIWYNPKMEI YHKIPHWRLE
KNYLINIARG CGLCIFQLRL INAKQGQSPM ILLRTILGNT RRLFWHIIKY NKNLNRNTVA
IVEFNFYLGS LLSPLYSLIF YCQKIANKDM SFNHD