Gene Ava_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0268 
Symbol 
ID3682955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp345546 
End bp346517 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content37% 
IMG OID637715596 
Productglycosyl transferase family protein 
Protein accessionYP_320789 
Protein GI75906493 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA ACATTGATTT TACCGTAGCC ATCCCCACTT ACAATGGTGC AAATCGCTTA 
CCTGAACTGT TAGAGAGGTT GCGAAATCAA ATTAACACCG AGAATATTTC TTGGGAAATT
ATTGTTGTCG ATAATAACAG CACCGATAAC ACAGCCCAAG TTGTACAACA GTACCAAGAA
AACTGGCAAT ATCCCTATCC TTTGAAATAT TATTTTGAAG CTAAACAAGG TGCAGCCTAC
GCCAGAAAAA AAGGTGTTGA AGTTTCTTCA GGACAACTAA TAGGTTTTTT AGATGATGAT
AACTATCCCA CACCTACATG GGTAGCAGCA GCTTTTGCTT TTGCTCAACA GCACCCCAAG
GCAGGGGCTT ATGGTAGCCA AATCCACCCA GATTGGGAAG TTGAACCACC AGAAGGCTTT
AAGTCCATAA CTCCCTTTTT AGCAATTACA GAACGTGGAA ATAAACCTCT ATTTTATGAC
CCTAGAAAAA AACTCCTCCC ACCTTCTGCT GGATTAGTTG TCCGTCGGGA AGCATGGTTA
GAAAGTGTAC CAGACCAGCC TATTTTAACT GGTAGAGTAA CTGGTAATAT GCTCACTGGT
GAAGATTTAG AAATGCTGTG TTATTTCCAG AAATCTGGAT GGGAAGTTTG GTATAGTCCG
GAAATGGAAA TTTATCATAA AATCCCAGAA TCTAGGTTAA AGAAAGAGTA TTTAATTCCG
TTTTTTAGGG GTATTGGCCT AAGTCGATAT GTCACTAGAA TGACAAATCT TAAAACCTAT
CAAAAGCCAT TTATCTTAAT TGCTTACATG ATAAATGATA TTAGAAAGCT CATTTTACAA
TTACTTAAAT ATGGAGACAA GATAGAAAAT GATTTGGTGA TAGCTTGCCA AACAGAACTT
TTAATCAATA GCCTCATTAG TCCTTTTTAT CTTTGGAAAA ATGGCTATTT AAATAAAGGC
AGCAAGTCAT AA
 
Protein sequence
MSKNIDFTVA IPTYNGANRL PELLERLRNQ INTENISWEI IVVDNNSTDN TAQVVQQYQE 
NWQYPYPLKY YFEAKQGAAY ARKKGVEVSS GQLIGFLDDD NYPTPTWVAA AFAFAQQHPK
AGAYGSQIHP DWEVEPPEGF KSITPFLAIT ERGNKPLFYD PRKKLLPPSA GLVVRREAWL
ESVPDQPILT GRVTGNMLTG EDLEMLCYFQ KSGWEVWYSP EMEIYHKIPE SRLKKEYLIP
FFRGIGLSRY VTRMTNLKTY QKPFILIAYM INDIRKLILQ LLKYGDKIEN DLVIACQTEL
LINSLISPFY LWKNGYLNKG SKS