Gene Ava_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0262 
SymbolxseA 
ID3682949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp335485 
End bp336768 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content45% 
IMG OID637715590 
Productexodeoxyribonuclease VII large subunit 
Protein accessionYP_320783 
Protein GI75906487 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACGAT TTGGATATAC TTGTACTAAT ATATTCAAAT TTTTGATGGC TGACGATTTC 
GCCGCTTCCG TAATTCTAGA TACAGCACTT TCTGTATCTG GATTAACTGA TTATCTCCGC
TTGCTGCTAG AAGATGATGA GCAACTACGG CAAGTGTGGG TAGTTGGGGA AGTTTCTAGT
GCTAATCATC ACCGCAGTGG GTTATTTTTT ACACTTCAAG ATCCCGATGG TACAGCAGCA
ATTAAGTGCG TGGTTTGGAA TAGCCAAGTA CCAAAGCTCG CTCAATTACC CATAGCGGGT
GAACAATTAA TTGTTTTAGG CAGTATTCGT TTATATCCAC AAAGGGGAGA GTATCAATTA
TCAGTCTGGC AAGCCATACC TGCTGGAGTT GGTTTACAAG CACTACGTTA TCAGCAACTC
AAAAATCGCT TGTTGGCTGA GGGGTTATTC GACCCCCAAA GAAAGCGATC GCTTCCTATT
CATCCCCAAA CCATCGCCGT TGTCACTTCA CCGACGGCGG CGGCTTGGGG TGATATTCAA
AAAACCCTTA AACATAGATA TCCCGGATTA CACGTTTTAT TTTCTCCTGC CACAGTCCAA
GGTGAACAAG CTCCAGAATC TATTGTGAAG GCGATCGCAC GAGTAGAAAA AGACGGTCGT
GCTGAGGTGC TAATCTTATC GCGCGGGGGT GGTGCCGTAG AAGAATTAGC TTGCTTTAAT
GATGAGCGGG TAGTCCGTGC TGTGGCTGAG TGTTCCATAC CCGTAGTGAC TGGGATTGGT
CATCAACGAG ACGAATCTTT AGTAGATTTA GCGGCTGATG TTTGTGTGCA TACACCGACG
GCAGCAGCAG AGAAGGTTGT ACCATCACTG GCAGAGTTAT ACAATCAACA TTGTCAGCGT
GTTATCGCTT TACATCAAGT TTTGCTCCAT ACTCAAACCT CTGCGGAAAA CCAACTACAA
ACATTACGGA ACCGTTTGCA GAATCTCAGA TTAGATAGAC ACTTGCAACA AGAAGCGCAA
AAATTAAATT GGCAACGTCA GCGATTGTGG CAATTAACAA TGGGGCGATC GCAGCAAGCC
AAACAACACC TAGAACTTTT GCGACAAAAG TTAAGCAGCC TCGACCCCAA AGCCGTATTA
CAGCGTGGTT ATGCAGTAGT GAAACAAGAA AACGGTGCGA TCGCTCGTTC TGCTGATGAA
TTAGCTGTAG GAAATGAGTT ATTCATTCAA CTGGCGCAAG GTGAAGTTAA GGCCAAAGTG
ATAGAAGTAA AACAACGGCA ATAA
 
Protein sequence
MLRFGYTCTN IFKFLMADDF AASVILDTAL SVSGLTDYLR LLLEDDEQLR QVWVVGEVSS 
ANHHRSGLFF TLQDPDGTAA IKCVVWNSQV PKLAQLPIAG EQLIVLGSIR LYPQRGEYQL
SVWQAIPAGV GLQALRYQQL KNRLLAEGLF DPQRKRSLPI HPQTIAVVTS PTAAAWGDIQ
KTLKHRYPGL HVLFSPATVQ GEQAPESIVK AIARVEKDGR AEVLILSRGG GAVEELACFN
DERVVRAVAE CSIPVVTGIG HQRDESLVDL AADVCVHTPT AAAEKVVPSL AELYNQHCQR
VIALHQVLLH TQTSAENQLQ TLRNRLQNLR LDRHLQQEAQ KLNWQRQRLW QLTMGRSQQA
KQHLELLRQK LSSLDPKAVL QRGYAVVKQE NGAIARSADE LAVGNELFIQ LAQGEVKAKV
IEVKQRQ