| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0254 |
|---|
| Symbol | |
|---|
| ID | 3682941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 325570 |
|---|
| End bp | 327417 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637715582 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_320775 |
|---|
| Protein GI | 75906479 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000406076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAA CAAGTTATGA ATTCGACCAA CCTATTTTAC CCGCCGGATT TTCATTAAAG
GCTAATATCC TACTACGTTT TCGTGCGGAA ATACCCGAAT CTCCCCGGCG CAACCTTAAC
CTTTCCCTTG TAATTGACCG CTCAGGTTCT ATGGCAGGTG CAGCTTTACA TCATGCCCTC
AAGGCGGCTG AATCTGTGGT AGATCAACTT GAGCCAAAGG ATATTCTCTC AGTGGTCGTT
TACGATGATG CGGTAGATAC GGTTGTTTCA CCCCAACCTG TAACTGACAA ACCTGCGCTC
AAAAAGTCCA TACGTCAGGT GAGGGCAGGT GGTATTACTA ACTTATCGGG AGGATGGCTC
AAGGGGTGCG AATATGTCAA GCATCAACTC GATCCGCAAA AAATAAATCG TGTGCTACTG
CTGACTGATG GTCATGCCAA TATGGGTATT CAAGACCCAA AGATACTCAC AGCCACATCA
GCCCAAAAAG CTGAAGAAGG GATTACTACA ACTACTTTGG GGTTTGCTCA AGGTTTCAAT
GAGGATCTAC TAATTGGGAT GGCGAGAGCT GCTAATGGCA ACTTCTACTT CATTCAAAGC
ATTGATGAAG CAGCAGAAGT TTTTAGCATT GAACTAGATA GTCTTAGAGC TGTAGTAGGT
CAAAACTTGA AAGTAACACT AGAGTTAGCT GATGGTATCA CTCTGGTTGA TACTTTAAGT
CTTGCTAAAG TTAGCCAAAA TGAAGCTGGT CAACCTGTAA TTACCTTGGG GGAGCTTTAC
GAGGGAGAAG ATAAGCTTCT GGGTTTGAGT TTGATGATAT CCTCTGCTCA AGTAGGTAAT
TTACCAGTGA TGAAGCTGCA TTACAGTGCT GATGTAGTGC AGAATGACGT TATTCAAAGG
GTTTCCGGAA CAACAGATGT CATCGCCAAA GTTGGCACAG TTGAGGAATC AGCGTTAGCC
TCTTCCAGTC ATATTATCCT CGACCTCAGC CGCCTGACGA TCGCCAAAGC TAAAGAAACA
GCCCTCGAAT TAGCAGAACA TGGTCAGCAT CAAGCAGCTG AAAAAACCCT CCGTGATTTG
GTGCAGTATC TCCGAGACCA AGGCTTAAAT GAGAATTTTG AAATTGCAGA AGAGATTGAT
CAGCTGGAGT ATTTCGCAGG TCGAATTGCA CAACAAGCTC TAGGTAACGC CGGGCGGAAA
GAACTACGTG ATCAAAGTTA TCAAACAATG ACGCGCAATC GCGGTGATCT GGTGGGGCGC
GGTGTCACTG CTGGCGATGA AGTACACGCA ATGCCGGTTG TCAATGAAAT CGGTACTGGG
GTGGAACTTG CTTGCGTCCG TGAAGGCGGT AAACTACGGA TTAAAGTTAT ATCTGATGGT
TACGACCAAA CTAAAAATGT TCAATTTCCC CGTTCCATTC GTGCTGAAGG AGCGCGGTAC
ATTGTTGAAG GGCTAGAATT GTCAAGTAAT GGCTCTTTCT ACCGTGTAGT CGGCAAAGTC
AGTCGTTTTG CCAAACCTGG TGAAACAGAC ATTTTTGTTG CTCCTAGACA ATCGAGATCA
ACTAACACAA GTAAAGCCTC CAAAGCTCCA GCTACTGCGG CCGATCTTCC CACCACTGAC
ACCATAGATC ATGGTGTTCT CATTCAATGC GTCAAAGATG GTAGCAAGTT ACGCGCTAGG
GTAGTCTCCG ACGGATATGA ACCGGATTGG AATATGCGTT TTCCCCGTTC CATTCGTGAG
GAAGGAATGC TTTATGTGGT TGAGGAAGTG AAGACAGCAC CTGATGGCAA GTCTTATATT
GCTTCTGGCG AGATTAAGCG ATTTTTACAA CCGAATATTA CTAACTAA
|
|---|
| Protein sequence | MVKTSYEFDQ PILPAGFSLK ANILLRFRAE IPESPRRNLN LSLVIDRSGS MAGAALHHAL
KAAESVVDQL EPKDILSVVV YDDAVDTVVS PQPVTDKPAL KKSIRQVRAG GITNLSGGWL
KGCEYVKHQL DPQKINRVLL LTDGHANMGI QDPKILTATS AQKAEEGITT TTLGFAQGFN
EDLLIGMARA ANGNFYFIQS IDEAAEVFSI ELDSLRAVVG QNLKVTLELA DGITLVDTLS
LAKVSQNEAG QPVITLGELY EGEDKLLGLS LMISSAQVGN LPVMKLHYSA DVVQNDVIQR
VSGTTDVIAK VGTVEESALA SSSHIILDLS RLTIAKAKET ALELAEHGQH QAAEKTLRDL
VQYLRDQGLN ENFEIAEEID QLEYFAGRIA QQALGNAGRK ELRDQSYQTM TRNRGDLVGR
GVTAGDEVHA MPVVNEIGTG VELACVREGG KLRIKVISDG YDQTKNVQFP RSIRAEGARY
IVEGLELSSN GSFYRVVGKV SRFAKPGETD IFVAPRQSRS TNTSKASKAP ATAADLPTTD
TIDHGVLIQC VKDGSKLRAR VVSDGYEPDW NMRFPRSIRE EGMLYVVEEV KTAPDGKSYI
ASGEIKRFLQ PNITN
|
|---|
| |