Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0252 |
Symbol | |
ID | 3682939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 323773 |
End bp | 324696 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637715580 |
Product | ribokinase |
Protein accession | YP_320773 |
Protein GI | 75906477 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.377165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTA TCGTCTTCGG TAGCATCAAT ATAGATTTAG TTGCCACAGC ACCCAAGTTA CCAATTGCAG GAGAAACCTT ACTGGGAGAA GACTTTTTCA AGGTTCCTGG GGGTAAAGGT GCAAACCAAG CTGTAGCAGT AGCCAAACTG GGAGTTCCTA CCCAAATGGT GGGACGTGTT GGCGCACATG GTTTTGGTGC AGAACTGATG GAAAATCTGC AAGATGCTGG CGTACAAACT GACAATATTT TTGTAGATGA AACTGCCAGT TCTGGAGTGG CGATGATTAC CGTCGCTCAT GATGGTGAAA ATCAAATAGT TGTCATTCCT GGTGCTAATG GGAGAGTCAA TCAAGCCGAT GTAGAACGAT TATCATACAT ATTACCCACA GCCACAGCCC TGCTATTACA ATTAGAAATT CCTATAACCG CCGTTATCGC AGCTGCCCAA GCCGCCAGAA GTAACAATAT CACAGTAATT TTAGATCCCG CACCTGCACC ATCAGATTTA CCAGCAGAAC TTTACCCTTT GATTGATATC ATTACCCCAA ATGAAGTGGA AGCGGGACAA ATCGTAGGTT TTCCCGTAGA TGGAGAAGAA GCAGCGCGAA AGGCAGCCGG GGTGTTATTG CAAAGAGGCG TGAAAAGTGC GATCGTTAAA CTGGGCGCTA AAGGTGTTGT TTGTGCCACA GACAAAGAGA CCTTTTTTGT CCCAGCCTTC TTTGTGGATA CAGTTGATAC TGTAGCGGCT GGTGATGCCT TTAATGGTGG TTTGGCAACA GCACTTTATT CTGGGCTTTC CTTACATCAG GCAGTTATTT GGGGTGCGGC GGCTGGTGCT TTAGCTGCAA CAAAATTAGG CGCACAAACT TCCTTGCCTG ACAAGTTGAC ATTTGAGGCT TTCCTCAAGG AAAGGGGTTT GTGA
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Protein sequence | MSIIVFGSIN IDLVATAPKL PIAGETLLGE DFFKVPGGKG ANQAVAVAKL GVPTQMVGRV GAHGFGAELM ENLQDAGVQT DNIFVDETAS SGVAMITVAH DGENQIVVIP GANGRVNQAD VERLSYILPT ATALLLQLEI PITAVIAAAQ AARSNNITVI LDPAPAPSDL PAELYPLIDI ITPNEVEAGQ IVGFPVDGEE AARKAAGVLL QRGVKSAIVK LGAKGVVCAT DKETFFVPAF FVDTVDTVAA GDAFNGGLAT ALYSGLSLHQ AVIWGAAAGA LAATKLGAQT SLPDKLTFEA FLKERGL
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