Gene Ava_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0222 
Symbol 
ID3683025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp283647 
End bp284342 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content45% 
IMG OID637715550 
Producthypothetical protein 
Protein accessionYP_320743 
Protein GI75906447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.01063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAA CTGCTTTAAA TCTAGTTGCA ATCTCTGTTT TTCTCATGAC GATGTCGGCT 
TTATTGGGGC CGTTAATTAA CTTATCGCCA GCAGTCCCCG CGATCGCTAC CTTCACAATT
TTAGGTATAG CAACTTTTGA TAGTTTTAGC TTGCAAGGCA AAGGCGGAAC TATCCTTTTA
GATTGGATTG CGGGGTTTTC ACCACAACAC CGCGATCGCA TTATTCACCA CGAAGCTGGA
CACTTTTTAG TGGCATACCT CTTGGGCGTT CCTGTTACAG GTTACACTCT CAGTGCATGG
GAAGCGTGGA GGCAAGGGCA ACCTGGCCAA GGCGGTGTTA CCTTTGATGA TGTTGAATTA
GTGTCTCAAG TAGAACAAGG TAAAATCAGT AATCAGGCAT TGGAACGCTA CTGCACTATT
TGTATGGCAG GAATCGCTGC GGAAACTTTG GTTTTTGAGC GCGCTGAAGG TGGAACCGAT
GATAAAAGCA AATTAGCAAC TATCTTTAAA GTCTTGGGTT TTTCTGAGTC AGTTTGTCAG
CAGAAACAAC GGTTTCATGT CCTCCAAGCC AAAACTTTAC TACAGAATAA CTGGGCGAGT
TACCAAGCTT TAGTCCAAGC TATACGTCAA AAATCAACGA TCGCCGATTG TCAAACAGCG
ATCGCTAATG CTCCTGTGGA AGCAGACAGA AGCTAG
 
Protein sequence
MSQTALNLVA ISVFLMTMSA LLGPLINLSP AVPAIATFTI LGIATFDSFS LQGKGGTILL 
DWIAGFSPQH RDRIIHHEAG HFLVAYLLGV PVTGYTLSAW EAWRQGQPGQ GGVTFDDVEL
VSQVEQGKIS NQALERYCTI CMAGIAAETL VFERAEGGTD DKSKLATIFK VLGFSESVCQ
QKQRFHVLQA KTLLQNNWAS YQALVQAIRQ KSTIADCQTA IANAPVEADR S