Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0221 |
Symbol | |
ID | 3683024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 282262 |
End bp | 283464 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637715549 |
Product | hypothetical protein |
Protein accession | YP_320742 |
Protein GI | 75906446 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00105596 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCAC AAGTACACTC CCACAACAAT AATCCCCAAG ATTGGTCATG GCCGTTCTGG CCTGCTTTAC CGCTTTATCC CTACGGTAGA AAGCGCACAC TTTGCCGGGA AGTAGTTAAA GATACCATTT GGACATTTGA CCAAGTTCAA GGCATTCTCT ACACCGTAGT GCCGATTAGG ATGACTGTAA TCAAGCTAAA TGCAGGTGGC TTGCTAATTT ATGCGCCAGT CGCCCCAACG AAGGAATGTG TCCGATTAGT TAATGAGTTA GTTGCCCAGC ATGGTGAAGT TAAGTACATA ATTCTACCTA CCAGTTCTGG TCTGGAACAT AAAATATTTG TCGGCCCCTT TGCGCGTAAG TTTCCCCAAG CACAGGTATT TGTTGCCCCC CATCAGTGGA GTTTCCCATT TAATTTACCA CTGAGTTGGC TGGGTTTTCC CCAAAACCGG ACTCAAGTAC TACCAGAAGA CTCTAGTCAA ACGCCTTTTG CGGATGAGTT TGATTATGCA GTACTGGATA TTAATCTGGG ACGAGGTTCT TTTGTGGAGG TGGCATTTTT CCATAGGCGA TCGCATACTC TACTTGTTAC CGATGCTGTT CTGTCTGTGC CAGCAGAACC ACCCGCTATC TTGGAATTAG AACCTTACCC CTTGCTATTT CACGCCAGGG ATAACGCAGG GCAAGTCATT GAAGATAACC CAGCTAACCG TCGCCAAGGA TGGCAGCGTA TTGCCCTATT TGCTATTTAC TTTCGCCCTA GCGCCCTGGG ATTAACTGAA TTGGGGCAGA TGTGGCGCGA TGCACTCAAA GCACCAGATC ATTCCGCCAA AGCATACTTC GGTTTTTTCC CCTTTCGCTG GCAAGAAAAT TGGCAACAGT CCTTTGCTGC CTTATCCGCC AATGGACGAC CTTTTGTCGC CCCGATTTTA CAAGTGCTGA TTCTGCCCCA AGCCCCAAAG AAAGTTCTTA ACTGGGCTGA TACAGTAGCA CAGTGGAATT TTCAACAGAT TATTTCCTGT CACTTTGACT CACCATTTAT CGCCAGTCCT GAACAATTTC GCCAAGCCTT CACTTTCCTA GAAAATAACT CTGTTGATAG CGACAATCAG GCTTTGTTGG TAGAAGATTT GCGATTCATC AAAGAACTGG AAGCAAATTT ATTGAAACGA GGCATTGCTA CACCACCGAG AGAGAAAGTT TAA
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Protein sequence | MNPQVHSHNN NPQDWSWPFW PALPLYPYGR KRTLCREVVK DTIWTFDQVQ GILYTVVPIR MTVIKLNAGG LLIYAPVAPT KECVRLVNEL VAQHGEVKYI ILPTSSGLEH KIFVGPFARK FPQAQVFVAP HQWSFPFNLP LSWLGFPQNR TQVLPEDSSQ TPFADEFDYA VLDINLGRGS FVEVAFFHRR SHTLLVTDAV LSVPAEPPAI LELEPYPLLF HARDNAGQVI EDNPANRRQG WQRIALFAIY FRPSALGLTE LGQMWRDALK APDHSAKAYF GFFPFRWQEN WQQSFAALSA NGRPFVAPIL QVLILPQAPK KVLNWADTVA QWNFQQIISC HFDSPFIASP EQFRQAFTFL ENNSVDSDNQ ALLVEDLRFI KELEANLLKR GIATPPREKV
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