| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0220 |
|---|
| Symbol | |
|---|
| ID | 3683023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 279866 |
|---|
| End bp | 281974 |
|---|
| Gene Length | 2109 bp |
|---|
| Protein Length | 702 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637715548 |
|---|
| Product | Serine/threonine protein kinase |
|---|
| Protein accession | YP_320741 |
|---|
| Protein GI | 75906445 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000803094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAT TATATTGTTC AAAAGGACAC GAGAATTACC CAGGGACTCG GTTCTGTCTT
AAGTGTGGGG AGAAGTTGGT GGATAATTTT TTTACACAGG GAATTCAACC TGGGTTAACT
TTAAGTGATC GCTATCTGAT TGTACGTCAA GTTGGTCAGG GGGGATTTGG GCGCACTTAT
TTAGCTGAAG ATATTAACCG TTTTCGTGAA CTTTGTATTT TAAAAGAATT TTCACCCCAA
GTTCAAACAG CCTACGTCTT ACAAAAAGCT GAGGAGTTGT TTCAACGGGA AGCCAAGGTT
CTCCATCAGC TACAACATCC CCAAATACCC CGCTTTCGAG AAATATTTCG TGTCAATCTA
GCCGGTAAAG AATATCTATT TTTAGTTCAA GATTATGTAG AAGGGGAAAC TTATAGTGGG
TTATTAAATC AACGCATACA GCAAGGGTTA CGGTTTACAG AAGCAGAAAT CCGTCAACTG
TTGCAGCAAA TTCTCCCAGT TTTGGACTAT ATCCATTCTC TGGGTGTGAT TCATCGTGAT
ATATCCCCAG ATAATCTCAT TCTTCGCAGT GTTGACAAGC TACCAGTATT GATTGATTTT
GGTGGTGTCA AACAAGTAGT AGCCGTTGTT GCATCTCAAT ATTATCAACC AGGTGTAGTT
GCATCTCCTC CAGCCGCTAC CCTACTAGGT AAAGTGGGAT TTGCACCACC AGAACAGATG
CAAACTGGAA ATGTCTCTCC CCACAGTGAT TTATATGCTT TGGCGGTCAC GGCAGTAGTT
TTACTGACTG GAAAACAACC ACAGGAATTA CTTGATACAT ATAACTTATC TTGGAATTGG
CGACGAGAAA TTAGCCTTAG TCCAATTTTT GGGCAAGTAT TAGATAAAAT GCTGGCGGCT
AGACCAGGCG ATCGCTATCA GTCTGCCCAG CAAATATTAC ACGCGCTTAA CCCAGCACCA
GTCAATTATC CCCCCACTCA ACCCCCCATA CCAACACCCC TTCCCACACC ACCACCTGTT
TCTACACCCG ATACAATTGC CGTAGCCCCA TCCCTTCCCA CTCCTGACAT TTCCCCCGCA
CCCCAAAGGA AAAACTGGTT GATACCAACC GCCGCATTCT TATTAGTCGG TACTGTTGGC
TTAGTTTGGT TAGGAATGAG TAACAGCGAT CGCAACTCTA TCTCAGTTGA CCCCACTCCC
ACCCCCACAG AGACACAACC CACCAACCCC CTAGATAAAT ACTCCCCCGC AGAACGGCAA
CGCAAACAAA CATTGAACGA TCGCCGTCAA CAGTTGGGTA TAGATTTTAA CTTTTACATT
AATGTAGTCA ATCAAATTTT CTGGGACAGA AACCCTAGTG AACGGGGACG CACCCTCAGC
GATGGGGCAG AAGATGAAAA CTTACGGACC GAATGGGATG CAGTCGCCGC CGAATTGTTA
GATAAACTCA AACCCCTGAG TAATCGGGCT AGACGACAAC TAGGTACTTA TACTGCCGCA
GAACGCGATC GCTGGAAAGT AGAAGTCAAT CAAATCAACG TTGGTAGCCG TTCTTTATAT
GATTTAGGTG ATGCAGCCTT CTTCAGAGCA TTTCCTGAAC AGAAGGGTAA AAACTTTATC
GAACAACCAA TTGGACAAGT TTGGCAAGCC TTTGTCAGTG ATAAACTGAG TGCGATCGTT
GCTGGTACTG TCTTTCAAAA GATTGTCTTT GATCCAGGCG CTACAAGTAA AACAGTCAGT
GGCACTCTCC AGCCTGCTGG CGGTAGAGTT TTTATTGCTG ACTTAGCTCA AAACCAATCT
CTAGAATTGC AGCTACAAGC CAACTCCAAA GTTTTATTAT CGGTATATTC CCCCTCAGGA
AAAACCATAT TTTTAGAAGA TTCTGAAAAA CGCAGCTTAT CAACTGAACT CCCAGAATCG
GGATTTTATG AGTTCGTTGT CGTGTCTACT GCATCCACAT CCGCAGATTA TCAACTCACC
CTCACAGTAG AAAATCCCAC CCCGCCACCA GAACCGACAC CAACCCCCAG CGAAACGACC
ACGCCTACAC CAACTCCCAG TGAAACGCCC ACAGAAACGC CCACACCTAC ACCAACTACA
GCACCGTAA
|
|---|
| Protein sequence | MTKLYCSKGH ENYPGTRFCL KCGEKLVDNF FTQGIQPGLT LSDRYLIVRQ VGQGGFGRTY
LAEDINRFRE LCILKEFSPQ VQTAYVLQKA EELFQREAKV LHQLQHPQIP RFREIFRVNL
AGKEYLFLVQ DYVEGETYSG LLNQRIQQGL RFTEAEIRQL LQQILPVLDY IHSLGVIHRD
ISPDNLILRS VDKLPVLIDF GGVKQVVAVV ASQYYQPGVV ASPPAATLLG KVGFAPPEQM
QTGNVSPHSD LYALAVTAVV LLTGKQPQEL LDTYNLSWNW RREISLSPIF GQVLDKMLAA
RPGDRYQSAQ QILHALNPAP VNYPPTQPPI PTPLPTPPPV STPDTIAVAP SLPTPDISPA
PQRKNWLIPT AAFLLVGTVG LVWLGMSNSD RNSISVDPTP TPTETQPTNP LDKYSPAERQ
RKQTLNDRRQ QLGIDFNFYI NVVNQIFWDR NPSERGRTLS DGAEDENLRT EWDAVAAELL
DKLKPLSNRA RRQLGTYTAA ERDRWKVEVN QINVGSRSLY DLGDAAFFRA FPEQKGKNFI
EQPIGQVWQA FVSDKLSAIV AGTVFQKIVF DPGATSKTVS GTLQPAGGRV FIADLAQNQS
LELQLQANSK VLLSVYSPSG KTIFLEDSEK RSLSTELPES GFYEFVVVST ASTSADYQLT
LTVENPTPPP EPTPTPSETT TPTPTPSETP TETPTPTPTT AP
|
|---|
| |