Gene Ava_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0216 
Symbol 
ID3683019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp275278 
End bp276219 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content41% 
IMG OID637715544 
Producthypothetical protein 
Protein accessionYP_320737 
Protein GI75906441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0666857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCGA AAACCGCACT CAATCTTTTT TCATTATTGT GGCAAAACTA TAGCGCCAGA 
GTTCCTTATG CACGTACTTA TGAGCAAATG ATTACTGCGG CTGGTGGAAC TGTGGCTAAT
GACCATATTG CTTTTCGGTC GTTACGTTTA TTGGTAGATA GCCCACGAGG TAAAGTAAAT
CTGGGTATTA ACTATCTGTC TCAAATAGCT GAAGCTTTGG GTTACGAACC TGCGGGAGAA
TATAACTTTC CCCAAACTCA TCTTTATGCC CGTCACTATC GTCATCCTCA ACAAATAGAG
TTTGATTTAC CTAAGTTATT TATCAGCGAA TTAATTGTTG ATGAATTGCC AGATAATATT
ATCCAACTCA TTACTCAAAC AGTCTCTACC GTTGCTGATG AATTTACTTC GCCTCTAACT
TATTTCTCAC CAGCAGAAGG AAACGACGGA GTTATTGCCC AACAATTGCA AAAGTTTTTC
ACCCGTCCTT GGATGACTCC TCGACGTTCT GTGGTGGAAG CAGTTAATCA AGTTACTCAA
TATGGTGCAT GGGTATTGTT ACACGGCTAT GCTGTTAACC ACTTTACAGG CTATGTTAAT
CGCCATCAAA CTCCAGAATA TGCAGATATA GATGATACTG CCCGTGGTTT GGCTAATTTG
GGTGTACCTA TGAAGGCAGA AATTGAAGGC GATGTTACCT GGGGTTTGCG TCAAACAGCA
ACCCAAGCAG TTAAGGAAAT GGTAACAGTT ATAGATGATA TTAGTGGTCA AGAAGTCGAA
ATTCCTTGGA CTTACGCCTA TTACGAAATA GCCCAACGTT ATCCCCTACA AGTGGAACCT
GGAAAAGAGA AGCTATTTGA TGGTTTTCTG GGAAATAATG CCCAACAGCT ATTTGAAATG
ACTAGACTGG TTGAGTGCGA TGCCGCAAAG ATAGGGAAAT AA
 
Protein sequence
MSPKTALNLF SLLWQNYSAR VPYARTYEQM ITAAGGTVAN DHIAFRSLRL LVDSPRGKVN 
LGINYLSQIA EALGYEPAGE YNFPQTHLYA RHYRHPQQIE FDLPKLFISE LIVDELPDNI
IQLITQTVST VADEFTSPLT YFSPAEGNDG VIAQQLQKFF TRPWMTPRRS VVEAVNQVTQ
YGAWVLLHGY AVNHFTGYVN RHQTPEYADI DDTARGLANL GVPMKAEIEG DVTWGLRQTA
TQAVKEMVTV IDDISGQEVE IPWTYAYYEI AQRYPLQVEP GKEKLFDGFL GNNAQQLFEM
TRLVECDAAK IGK