Gene Ava_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0215 
Symbol 
ID3683018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp274312 
End bp275091 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content41% 
IMG OID637715543 
Producthypothetical protein 
Protein accessionYP_320736 
Protein GI75906440 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0180018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCG CCCAAGATTT ACAACCAGTA GCAGGTATAA TATTTCCGCC AGGAGATATT 
GAAAGTGACC AACCAATAGA AGATATAATA TTTCCGCCAG GAGATATTGA AAGTCACGAA
CCACCATTGG AAAGCGATTT ACATCTACGC CAGATTATTC TGTTATTACA GTGCTTAGAA
TTGTGGTGGC AAAACCGCAA TGACTTTTAT GCGGCGGGAA ATTTGACAAT TTATTATAGC
CAACGTCAAC TCAAATCAGA GGACTTTCGC GGCCCTGATT TTTTTGTGGT GCGAGGATGC
GACAAGAAAC CACGCAAAAG TTGGGTAATC TGGCAAGAAG ACGGTAAGTA TCCCAATATC
ATTGTTGAAT TGCTGTCACC TTCGACAAAA GCCACGGATA AAGATTTAAA AAAGCAAATT
TATCAAGATA TCTTTCGCAC ACCAGAATAT TTTTGGTTTG ACCCCAATAA TTTAGAATTT
GTCGGATTTC ATTTAGTAGA TGGTCATTAT CAACCTATAG AACCAAATCC CCAAGGTTGG
TTATGGAGTC AGCAGTTAGA TTTACACTTG GGTGTGCAGA ACAATCAGTT ACGCTATTTC
ACAGCAGAAG GACAGTTAGT ACCAACACCT GAAGAATTGG CACAACAGGA AACATTGCGC
GCGGAACAGC AAACACTACG TGCTGAACAA GAAACACTGC GTGCTGAACA AGAAAAGCAA
CGTGCTGAAC GCCTAGCCGC TAAGTTGCGA GAATTGAATA TTGACCCTGA TAATCTATAA
 
Protein sequence
MSIAQDLQPV AGIIFPPGDI ESDQPIEDII FPPGDIESHE PPLESDLHLR QIILLLQCLE 
LWWQNRNDFY AAGNLTIYYS QRQLKSEDFR GPDFFVVRGC DKKPRKSWVI WQEDGKYPNI
IVELLSPSTK ATDKDLKKQI YQDIFRTPEY FWFDPNNLEF VGFHLVDGHY QPIEPNPQGW
LWSQQLDLHL GVQNNQLRYF TAEGQLVPTP EELAQQETLR AEQQTLRAEQ ETLRAEQEKQ
RAERLAAKLR ELNIDPDNL