Gene Ava_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0211 
Symbol 
ID3683014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp270066 
End bp270725 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content39% 
IMG OID637715539 
Productpentapeptide repeat-containing protein 
Protein accessionYP_320732 
Protein GI75906436 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATT TTGCTGAACC ACAAGCATTA CTCCTGAGTC AAATCAAAGA TAAACTTTGT 
CCGCGTCGAG ATTTTAATGG CTGTAATTTG AGTGGAATTG ACTTAAGTAC AGTTGATTTA
AGTGGTGTTA ACTTAATAGG GGCAGATTTA AGTTTTGCCA ATTTGTCTGG TTGTATTCTT
ACGGGTGCAA ACCTGACTGA AGCAAACTTA ATGCAAGCTA ATTTGCGTGA GGCTAAGTTG
CATGAAGCTG TTTTATCAGA AGCTAATTTG ACAGATGCCG ATTTAACACA AGCGAATTTG
TGTGGAGCTT TGTTATGGCG ATCGCAATGT CGTAATATTA ATCTTTGGGG TGCTTCTTTA
TGCGCGGCTG ATTTACGTGA AGCTGACCTA ACTCAAGGCA CATTAGTAGA GACATCTTTA
ATTGAGGGCA ATCTATCCAG AGCTAATTTG ACAGATGCAA AGTTATCTGG AGCCACACTA
CTAGAAGCTA ACTTAACAGG GGTCAACTTC ACTAACACTG ACCTGACATG GGCAAATTTG
ACCAAAGCCA ACTTAACTAA TGCCAACCTA GAAGGAACAA AAATAGCTTT AGCTAAGTTA
CACGATACCA TTATGCCTGA TGGTAAAATC TGCAATCCCC AAATAGTGAT TTGGGAATAA
 
Protein sequence
MRNFAEPQAL LLSQIKDKLC PRRDFNGCNL SGIDLSTVDL SGVNLIGADL SFANLSGCIL 
TGANLTEANL MQANLREAKL HEAVLSEANL TDADLTQANL CGALLWRSQC RNINLWGASL
CAADLREADL TQGTLVETSL IEGNLSRANL TDAKLSGATL LEANLTGVNF TNTDLTWANL
TKANLTNANL EGTKIALAKL HDTIMPDGKI CNPQIVIWE