Gene Ava_0206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0206 
Symbol 
ID3683068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp265017 
End bp265937 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content45% 
IMG OID637715534 
Producthypothetical protein 
Protein accessionYP_320727 
Protein GI75906431 
COG category[R] General function prediction only 
COG ID[COG1090] Predicted nucleoside-diphosphate sugar epimerase 
TIGRFAM ID[TIGR01777] conserved hypothetical protein TIGR01777 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.886073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAG CAATTACAGG CGCAACAGGA TTTGTCGGAA CTCGACTAGT ACAAAGACTT 
CACAAAGAAG GTCATCAAAT AATTGTCTTA ACCCGTAACA CTGCATCGGC TCGCAGGCAT
TTTCCTGCAC AAACATTTGC CAATGTAGAA ATTGTTGCTT ATACACCCAC TACATCCGGG
GCGTGGCAAG ATGTAATTGC CGGTTGTGAT GGTGTAGTCA ACTTGGCAGG AGAACCCATC
GCAGAGGCAC GCTGGACACC AGAACACAAA CGAGAGATTC TTAACAGTCG TCAACTAGGC
ACACAGAAAA TAGTCGAAGC CATAGCGAAA GCTAACCCCA AGCCTACAGT ATTAGTTAAC
GCTTCGGCTA TTGGTTATTA CGGTACAAGT GAAACCACTA CCTTTGATGA AAATAGCCCC
TCTGGTAGGG ATTTTCTCGC TCAAGTTTGT CAAGCTTGGG AAGCAGAAGC CCAAAAAGTG
AAACAATCAG GCGTTCGCCT AGTGATACTA CGTTTAGGTA TTGTTCTAGG GTTGGGTGGT
GCTTTAGGAA AAATGATTAC CCCTTTTAAA CTCTATGCTG GGGGGCCAAT TGGTAGCGGT
CGTCAATGGT TTTCTTGGAT TCACATTGAT GATTTGGTGA ATCTGATTGT GCAAGCCTTA
ACCAACCCAC AACTAGAAGG GGTATATAAT GCTACTGCAC CCCATCCAGT TCGCATGACT
GACTTAAGCC AAACGATGGG ACAAGTAATG AACCGTCCTT CATGGTTACC TGTCCCGGCT
TTTGCTCTAG AAGCTCTTTT GGGAGATGGG GCGATCGTTG TTCTAGAAGG TCAACAAGTA
CTTCCCAAAC GAGCCTTAGA AGCCGGGATT AAATATCAGT ATCAGAATTT ACAACCAGCC
TTACAAGAAA TTTTGCAATA A
 
Protein sequence
MKVAITGATG FVGTRLVQRL HKEGHQIIVL TRNTASARRH FPAQTFANVE IVAYTPTTSG 
AWQDVIAGCD GVVNLAGEPI AEARWTPEHK REILNSRQLG TQKIVEAIAK ANPKPTVLVN
ASAIGYYGTS ETTTFDENSP SGRDFLAQVC QAWEAEAQKV KQSGVRLVIL RLGIVLGLGG
ALGKMITPFK LYAGGPIGSG RQWFSWIHID DLVNLIVQAL TNPQLEGVYN ATAPHPVRMT
DLSQTMGQVM NRPSWLPVPA FALEALLGDG AIVVLEGQQV LPKRALEAGI KYQYQNLQPA
LQEILQ