Gene Ava_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0194 
Symbol 
ID3683056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp249160 
End bp249597 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content43% 
IMG OID637715522 
ProductAlkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_320715 
Protein GI75906419 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.070617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTAG CGGTTGGTAC GGATGCACCT GCATTTACCG TCAAAGATAC CAACGGTAAC 
ACCGTTTCGC TATCTGATTT TGCTGGGAAG ACAGTGGTTT TGTATTTTTA CCCCAAAGAT
GACACACCAG GCTGCACTAA ACAAGCTTGT AGCTTCCGTG ATGCTCAATC TGATTACAAA
AACAAGGATG TAGTTGTTTT GGGTGTGAGT GCTGATGATG AAGGTTCTCA TCAAGCATTT
ACTCAAAAAT ATAATTTGAA TTTTCCCTTG CTGGCTGACA CTAATAAAAC CTTAATCAGC
GCCTATGACG TTGATGGCGG TGGTTATGCT AAGCGTGTCA CTTACGTAAT TGGCCCCGAC
GGTAAAATTG TTCATGTTGA TGCCAGTGTC AACACAACAA CCCATGCTAG CGATGTTTTA
GCTGCTTTGG GACTGTAA
 
Protein sequence
MPLAVGTDAP AFTVKDTNGN TVSLSDFAGK TVVLYFYPKD DTPGCTKQAC SFRDAQSDYK 
NKDVVVLGVS ADDEGSHQAF TQKYNLNFPL LADTNKTLIS AYDVDGGGYA KRVTYVIGPD
GKIVHVDASV NTTTHASDVL AALGL