| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0192 |
|---|
| Symbol | |
|---|
| ID | 3683054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 247771 |
|---|
| End bp | 248658 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637715520 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_320713 |
|---|
| Protein GI | 75906417 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.144906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAA CCCCAAAATC AGATATCAAT TGGCAACCAG CCACATCACC GCAAGCTAAC
GTTAATACTG CACCTAACTT TTTTGGTGAA CTAGTGCAGG AAACCCTGGC GTTAACTCGT
CGCTTGTTTA TTCAATTACA ACGCCGTCCC TCCACCTTAT TAGCTGGGAT TATTCAGCCT
GTAATGTGGT TAGTGTTATT TGGCGCTTTG TTCCAAAATG CTCCTAAAGG TTTATTTGGG
AGTACGACAA ATTACGGGCA ATTTTTAGCT GCGGGTGTCA TCGTCTTTAC AGCCTTTGCC
GGAGCGCTGA ATGCTGGTTT ACCTGTAATG TTTGACCGTG AGTTCGGCTT TTTGAATCGG
TTATTAGTCG CTCCCCTCGC ATCCAGATTT TCTATTGTCT TTGCTTCAGC CATTTTTATT
GTTAGTCAAA GTTTATTGCA AGCGGCTGTA ATCGTTGGTG CGGCAGCGTT TCTGGGTGCT
GGCTTACCAG ATGTAGCGGG ACTGGGTGCG ATCGCCTTAA TTGTCTTTCT ACTGGCTTTA
GGTGTGACAG CAATTTCCTT GGGATTGGCT TTTGCCCTAC CAGGACACAT TGAATTAATT
GCAGTAATCT TTGTCACTAA CCTACCATTA CTTTTTGCAA GTACGGCTCT CGCTCCTTTA
TCCTTTATGC CCCAGTGGTT GCAGGTTGTT GCTACCCTCA ATCCTCTCAG CTACGCCATT
GAACCAATTC GTTATCTCTA TCTCCACAGT CATTGGGGAT TGGGTGATGT GGTCATGCAA
GCACCTTGGG GTGATGTCAC TTTTGGAGGA GCCTTGCTAA TATTGTTTAG CTTTGCTTTT
GTTGCATTGT TGAGTATTCA GCCCCAACTA CGGCGGACTC TTGCTTAA
|
|---|
| Protein sequence | MSVTPKSDIN WQPATSPQAN VNTAPNFFGE LVQETLALTR RLFIQLQRRP STLLAGIIQP
VMWLVLFGAL FQNAPKGLFG STTNYGQFLA AGVIVFTAFA GALNAGLPVM FDREFGFLNR
LLVAPLASRF SIVFASAIFI VSQSLLQAAV IVGAAAFLGA GLPDVAGLGA IALIVFLLAL
GVTAISLGLA FALPGHIELI AVIFVTNLPL LFASTALAPL SFMPQWLQVV ATLNPLSYAI
EPIRYLYLHS HWGLGDVVMQ APWGDVTFGG ALLILFSFAF VALLSIQPQL RRTLA
|
|---|
| |