Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0183 |
Symbol | |
ID | 3683142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 238427 |
End bp | 239629 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637715511 |
Product | peptidase M23B |
Protein accession | YP_320704 |
Protein GI | 75906408 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.956572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0114349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGC CAATTGTCCA ACAAATAAGA TTTTGGAAAT TATGTATTGT ATTGTGCTGT GTTTTGTGCA TATGTTTGGT GTCAATACCA GTATTTGCTA ATAATTCCGC TTCCATTGAT ACCCTAAAAC AGCAGCAGCA ACAAATTCAG CAAGAAAGGC AAAATGTTGT ACAAGAACGC GATCGCCTCA CTAATCTACA ACAAGCAGCG CAAAATCGCC TGACTGGTAT TGCTAACAAT TTGCAAACCA CCAACAGTCA AATTAAAGAT AGTGAATTGC GATTACAACA GGCTAGCCAA CGCCTCCAAC AGCTAGAGGC CAAATTAGCT GTGACGGAAC GTGCTTATGA AGAACGTCAA GTTGCCACAG TAGCACGATT GCGATATCTC CAGCGATCGC CTCTCAATCA AGGATGGGCT GTTTTATTGC AAAGCAGAGA TATCGGTGAT TTTTTCAGTC GTCGTCATCA GTTGAAGTTA GTTTATCAGG CAGACCAGCA AATTTTGGCG AAACTCAGCA CTCAAGCCAA CTTGATTAAT CAGCAGAAAA CTAAAGTAGA GGAGCAAAAA AACGAAGTTG CTTTGATTCG GGAACAACTA TTGACGCAAA AATCTGATTA TCAAGCTCAA GCTCAATCTC AGTCAGAATT AATACAACGC TTAAGTAGCG ATCGCCTGGC CTTAGAAGCC GCACAAAATC AACTAGAGAG AGATTCTAAA AACCTGGAAG GGTTAATTCA GCAAAAGGTA GCAGAAGCCA AAGCCAGAGA AGAAGCACAA GCCAAAACCA ATAGCCGGAC AAACATCATC ATCAAAGGAA CAGGGCTTTT TGCCTTTCCT AGCAGTGCGC CTACAAGTAG TCCCTTCGGT TGGCGCGTAC ACCCCATTCT CGGCTATCGC AGGTTTCACT CTGGGTTGGA TTTTGCCGCT AGTTATGGCA GTACAATCAG GGCAGCCGAT TCGGGAACAG TAATTTTTGC TGGCTGGTAT GGCGGTTATG GTAGGGCTGT AATTATTAAT CATGGTGGTG GGATCACGAC ACTGTACGGA CACGCCAGTG AATTATATGT TGCCGAGGGG CAACCAGTAC AACGAGGGCA GGCGATCGCG GCTGTTGGTT CCACAGGCTT ATCTACCGGG CCACATCTGC ATTTTGAAGT TCGTCGCAAT GGCACACCAG TCAACCCAGG AGATTATCTT TAG
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Protein sequence | MKAPIVQQIR FWKLCIVLCC VLCICLVSIP VFANNSASID TLKQQQQQIQ QERQNVVQER DRLTNLQQAA QNRLTGIANN LQTTNSQIKD SELRLQQASQ RLQQLEAKLA VTERAYEERQ VATVARLRYL QRSPLNQGWA VLLQSRDIGD FFSRRHQLKL VYQADQQILA KLSTQANLIN QQKTKVEEQK NEVALIREQL LTQKSDYQAQ AQSQSELIQR LSSDRLALEA AQNQLERDSK NLEGLIQQKV AEAKAREEAQ AKTNSRTNII IKGTGLFAFP SSAPTSSPFG WRVHPILGYR RFHSGLDFAA SYGSTIRAAD SGTVIFAGWY GGYGRAVIIN HGGGITTLYG HASELYVAEG QPVQRGQAIA AVGSTGLSTG PHLHFEVRRN GTPVNPGDYL
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