Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0178 |
Symbol | |
ID | 3683136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 231996 |
End bp | 232730 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637715505 |
Product | ABC transporter-like |
Protein accession | YP_320699 |
Protein GI | 75906403 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000118822 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0540962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATT ACGTAATTGA ATGTCACAAC TTAGAGACAG CTTATGTTGG CTCTTTGAAT CGCCCCATCC TCAACGAGAT TAGTTGTCAC ATCAAACAGG GTGAATTTGT TGTACTGCTA GGACTCAATG GAGCTGGTAA GTCTACGTTA TTGCGATCGC TGGTTGGGTT AGTGCCATTA GTCAAGGGAG AAGTCCACAT CAACGGCGTA GCAATGAATA GCCGCATACT TCCCCAAATT CGCCGTGATG TAGGAATGTT GTTTCAAGGC GGTGGTTTGA TTCCCCAGTT ATCAGCCATT GAAAATGTAT TGTGCGGTAG ACTTGGCACG AGAACAACTT GGCAGACATT ATTTGGCTTT CCCAAACGCG ATCGCCTATT GGCATTAGAA TTACTCGAAC AGTTGGGTTT AAGAGAGTTA GCTTACCAAA GAACTAGCAA ACTCAGTGGT GGACAACAAC AAAGAGTAGC GATCGCTCGT GCTTTAATTC AATCACCGCA AATACTCCTA GCCGATGAAC CCACAACGGG ATTAGATGTC ATCGCCACCC AACAAGTAAT GGAGACCTTA GCGGAATTAC ACACCCAGCA AGGTATGACA GTTGTCGCAG TTCTGCATGA TTTGGGAATG GCTGCCAGAT ATGCCCAACG AGCGATCGTT CTAGATGCCG GACGCATTGT TTACGAGGGT TCCTGCGATA ACCTGCAAGC ACAGTTTGTG GTAAATAGTC AATAG
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Protein sequence | MSDYVIECHN LETAYVGSLN RPILNEISCH IKQGEFVVLL GLNGAGKSTL LRSLVGLVPL VKGEVHINGV AMNSRILPQI RRDVGMLFQG GGLIPQLSAI ENVLCGRLGT RTTWQTLFGF PKRDRLLALE LLEQLGLREL AYQRTSKLSG GQQQRVAIAR ALIQSPQILL ADEPTTGLDV IATQQVMETL AELHTQQGMT VVAVLHDLGM AARYAQRAIV LDAGRIVYEG SCDNLQAQFV VNSQ
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