| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0177 |
|---|
| Symbol | |
|---|
| ID | 3683135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 231056 |
|---|
| End bp | 231850 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637715504 |
|---|
| Product | phosphonate ABC transporter permease |
|---|
| Protein accession | YP_320698 |
|---|
| Protein GI | 75906402 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000132377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0614362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTATT TACCACTTTC CAAACTCCTA CGGCGCTACT CTTGGGTAAG CTCCCTCATC
ATCTTATTAA TTGCTTTTAT AATTTACACT TGGGCTTTGC AAGGACTGAA AGTTGATTTC
GCCCTTTTGA CATCTAGCGC CCCTTACATT GCTGATTTCA TCTCACGGTT ATTTCCTCCT
GACTTCACAG TTATTGATAT CGCTGTTAAA GCACTGATAG AAACCGTACA GATGTCCCTT
TGGGGGACAA CCATCGGTGC TATTATCTCA GTGCCAATAG CCGTCGCTAG CGCTAGTAAT
GTTGCACCTA GTTGGCTGCA ATGGTTGGCA AATCTGCTGC AAAATGCGGT GCGTTCCGTT
CCTTCAATTA TTCTGGGGCT AATTTTTGTT GCCGCCACAG GCTTAGGCGC ACCCGCAGGC
ACCCTAGCCT TGAGTATATA CACAGTTGGT TACCTAGCAA AGTTTTATCA ACAAGCGATC
GAAGCAGTCC AGCCTCGTTC TTTAGAGTCT CTGCAAGTTA TAGGCGCATC TCGATTCCAA
ATTGCTCAGT ATGGAATCCT ACCCCAAGTG TTGCCTCTAA GTTTGGGCTA TACCTTATGG
ATGTTTGAAT ACAACATCCG CGCCGCTTCT GTTTTGGGTG TGGTTGGTGC AGGTGGGATT
GGCTTTCAAT TAAAAAGTTA CATTGATGGG TTTGAGTACA ATAAAGCCAC AACTATGATG
TTAGTACTGT TGGTAGTTGT GACTGTAATA GATGGCTTCA GCAGCCAGTT ACGCCGCCGC
CTTGAATCGA TGTAA
|
|---|
| Protein sequence | MSYLPLSKLL RRYSWVSSLI ILLIAFIIYT WALQGLKVDF ALLTSSAPYI ADFISRLFPP
DFTVIDIAVK ALIETVQMSL WGTTIGAIIS VPIAVASASN VAPSWLQWLA NLLQNAVRSV
PSIILGLIFV AATGLGAPAG TLALSIYTVG YLAKFYQQAI EAVQPRSLES LQVIGASRFQ
IAQYGILPQV LPLSLGYTLW MFEYNIRAAS VLGVVGAGGI GFQLKSYIDG FEYNKATTMM
LVLLVVVTVI DGFSSQLRRR LESM
|
|---|
| |